Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 NIFKP9-201ENST00000419265 221 ntBASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 AL445675.2-201ENST00000620291 557 ntBASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.92■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.92■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.92■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 AC004980.1-204ENST00000429707 299 ntBASIC16.92■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.92■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.92■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.92■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.92■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.9■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.9■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.9■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.9■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms