Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 NOC2LP2-201ENST00000407594 1944 ntBASIC16.49■□□□□ 0.23
TRAV18A0A075B6X5 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 C2orf69P4-201ENST00000565394 541 ntBASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 CYP2T3P-201ENST00000601990 817 ntBASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV18A0A075B6X5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV18A0A075B6X5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV18A0A075B6X5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV18A0A075B6X5 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRAV18A0A075B6X5 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV18A0A075B6X5 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV18A0A075B6X5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV18A0A075B6X5 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV18A0A075B6X5 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV18A0A075B6X5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
TRAV18A0A075B6X5 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV18A0A075B6X5 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV18A0A075B6X5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV18A0A075B6X5 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV18A0A075B6X5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
TRAV18A0A075B6X5 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV18A0A075B6X5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV18A0A075B6X5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV18A0A075B6X5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV18A0A075B6X5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV18A0A075B6X5 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV18A0A075B6X5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 AL355472.2-201ENST00000422958 438 ntBASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV18A0A075B6X5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV18A0A075B6X5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV18A0A075B6X5 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV18A0A075B6X5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 AC068880.1-201ENST00000507289 2297 ntBASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV18A0A075B6X5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms