Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGC4Q9Y5F7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGC4Q9Y5F7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGC4Q9Y5F7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCDHGC4Q9Y5F7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.38■□□□□ 0.69
PCDHGC4Q9Y5F7 RBM17P1-201ENST00000453646 1190 ntBASIC19.38■□□□□ 0.69
PCDHGC4Q9Y5F7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
PCDHGC4Q9Y5F7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PCDHGC4Q9Y5F7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGC4Q9Y5F7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.38■□□□□ 0.69
PCDHGC4Q9Y5F7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHGC4Q9Y5F7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHGC4Q9Y5F7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHGC4Q9Y5F7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHGC4Q9Y5F7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PCDHGC4Q9Y5F7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGC4Q9Y5F7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC4Q9Y5F7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC4Q9Y5F7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC4Q9Y5F7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC4Q9Y5F7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC4Q9Y5F7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PCDHGC4Q9Y5F7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHGC4Q9Y5F7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PCDHGC4Q9Y5F7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC4Q9Y5F7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC4Q9Y5F7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC4Q9Y5F7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHGC4Q9Y5F7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC4Q9Y5F7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC4Q9Y5F7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.37■□□□□ 0.69
PCDHGC4Q9Y5F7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.37■□□□□ 0.69
PCDHGC4Q9Y5F7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC4Q9Y5F7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC4Q9Y5F7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC4Q9Y5F7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC4Q9Y5F7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC4Q9Y5F7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC4Q9Y5F7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 TEX21P-204ENST00000641479 1693 ntBASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 AC079598.2-202ENST00000546624 1451 ntBASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 UNC93B2-201ENST00000285383 730 ntBASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 FAM207BP-201ENST00000447172 505 ntBASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC4Q9Y5F7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHGC4Q9Y5F7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PCDHGC4Q9Y5F7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PCDHGC4Q9Y5F7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC4Q9Y5F7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC4Q9Y5F7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC4Q9Y5F7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHGC4Q9Y5F7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC4Q9Y5F7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC4Q9Y5F7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PCDHGC4Q9Y5F7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHGC4Q9Y5F7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHGC4Q9Y5F7 AP000525.1-201ENST00000608286 694 ntBASIC19.35■□□□□ 0.69
PCDHGC4Q9Y5F7 AP000692.2-201ENST00000608391 879 ntBASIC19.35■□□□□ 0.69
PCDHGC4Q9Y5F7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHGC4Q9Y5F7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC4Q9Y5F7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC4Q9Y5F7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC4Q9Y5F7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC4Q9Y5F7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC4Q9Y5F7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGC4Q9Y5F7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHGC4Q9Y5F7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.34■□□□□ 0.69
PCDHGC4Q9Y5F7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms