Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.7■□□□□ 0.1
RCL1Q9Y2P8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 SUDS3P1-201ENST00000505831 966 ntBASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 AL591742.1-201ENST00000604433 565 ntBASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.69■□□□□ 0.1
RCL1Q9Y2P8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 UBE2DNL-204ENST00000602536 740 ntBASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 ZNF815P-204ENST00000434898 1737 ntBASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RCL1Q9Y2P8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 IRX1P1-201ENST00000438849 1838 ntBASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 AC016405.3-201ENST00000607710 860 ntBASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 AC105020.6-201ENST00000621523 1217 ntBASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RCL1Q9Y2P8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms