Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.4■□□□□ 0.54
VPS29Q9UBQ0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.4■□□□□ 0.54
VPS29Q9UBQ0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.4■□□□□ 0.54
VPS29Q9UBQ0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VPS29Q9UBQ0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
VPS29Q9UBQ0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
VPS29Q9UBQ0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.39■□□□□ 0.54
VPS29Q9UBQ0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
VPS29Q9UBQ0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 AC006333.2-201ENST00000607957 2099 ntBASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 AL023875.1-201ENST00000640777 796 ntBASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS29Q9UBQ0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 AC239809.2-201ENST00000415381 517 ntBASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 AL160286.2-201ENST00000567150 934 ntBASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 HLA-A-209ENST00000638375 975 ntBASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
VPS29Q9UBQ0 FEM1AP3-201ENST00000403722 1741 ntBASIC18.37■□□□□ 0.53
VPS29Q9UBQ0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS29Q9UBQ0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS29Q9UBQ0 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.37■□□□□ 0.53
VPS29Q9UBQ0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS29Q9UBQ0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
VPS29Q9UBQ0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS29Q9UBQ0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VPS29Q9UBQ0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS29Q9UBQ0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VPS29Q9UBQ0 KRASP1-201ENST00000407852 552 ntBASIC18.37■□□□□ 0.53
VPS29Q9UBQ0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS29Q9UBQ0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VPS29Q9UBQ0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
VPS29Q9UBQ0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.37■□□□□ 0.53
VPS29Q9UBQ0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.37■□□□□ 0.53
VPS29Q9UBQ0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS29Q9UBQ0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS29Q9UBQ0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS29Q9UBQ0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.37■□□□□ 0.53
VPS29Q9UBQ0 CROCCP3-202ENST00000420820 1947 ntBASIC18.37■□□□□ 0.53
VPS29Q9UBQ0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS29Q9UBQ0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
VPS29Q9UBQ0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS29Q9UBQ0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS29Q9UBQ0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.36■□□□□ 0.53
VPS29Q9UBQ0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS29Q9UBQ0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms