Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.32■□□□□ 0.36
HINT3Q9NQE9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.32■□□□□ 0.36
HINT3Q9NQE9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HINT3Q9NQE9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 AC005082.1-201ENST00000413042 2259 ntBASIC17.31■□□□□ 0.36
HINT3Q9NQE9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HINT3Q9NQE9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 AC006557.6-201ENST00000623071 864 ntBASIC17.3■□□□□ 0.36
HINT3Q9NQE9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 IRX1P1-201ENST00000438849 1838 ntBASIC17.3■□□□□ 0.36
HINT3Q9NQE9 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HINT3Q9NQE9 Z98044.1-201ENST00000632503 1764 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms