Protein–RNA interactions for Protein: Q9NQC8

IFT46, Intraflagellar transport protein 46 homolog, humanhuman

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46Q9NQC8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
IFT46Q9NQC8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
IFT46Q9NQC8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IFT46Q9NQC8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IFT46Q9NQC8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IFT46Q9NQC8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IFT46Q9NQC8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IFT46Q9NQC8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.53■□□□□ 0.24
IFT46Q9NQC8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IFT46Q9NQC8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IFT46Q9NQC8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
IFT46Q9NQC8 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 AC018470.1-201ENST00000624790 3129 ntBASIC16.52■□□□□ 0.24
IFT46Q9NQC8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 AC006333.2-201ENST00000607957 2099 ntBASIC16.52■□□□□ 0.24
IFT46Q9NQC8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 MFSD11-216ENST00000590393 1141 ntBASIC16.52■□□□□ 0.24
IFT46Q9NQC8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
IFT46Q9NQC8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IFT46Q9NQC8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
IFT46Q9NQC8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IFT46Q9NQC8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
IFT46Q9NQC8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
IFT46Q9NQC8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IFT46Q9NQC8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
IFT46Q9NQC8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
IFT46Q9NQC8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
IFT46Q9NQC8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IFT46Q9NQC8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.52■□□□□ 0.23
IFT46Q9NQC8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IFT46Q9NQC8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
IFT46Q9NQC8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
IFT46Q9NQC8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
IFT46Q9NQC8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 AC099398.1-201ENST00000567919 2776 ntBASIC16.51■□□□□ 0.23
IFT46Q9NQC8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 MCRIP2P1-201ENST00000394346 511 ntBASIC16.51■□□□□ 0.23
IFT46Q9NQC8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 TERF1P5-201ENST00000477545 1207 ntBASIC16.51■□□□□ 0.23
IFT46Q9NQC8 KRT18P14-201ENST00000534205 1250 ntBASIC16.51■□□□□ 0.23
IFT46Q9NQC8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 TNRC18P3-201ENST00000441896 2691 ntBASIC16.51■□□□□ 0.23
IFT46Q9NQC8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
IFT46Q9NQC8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IFT46Q9NQC8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms