Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 FAM197Y1-201ENST00000421178 764 ntBASIC16.4■□□□□ 0.22
GCM1Q9NP62 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.4■□□□□ 0.22
GCM1Q9NP62 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.4■□□□□ 0.22
GCM1Q9NP62 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.4■□□□□ 0.22
GCM1Q9NP62 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.4■□□□□ 0.22
GCM1Q9NP62 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.4■□□□□ 0.22
GCM1Q9NP62 CR392000.1-201ENST00000624770 1228 ntBASIC16.4■□□□□ 0.22
GCM1Q9NP62 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.4■□□□□ 0.22
GCM1Q9NP62 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GCM1Q9NP62 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GCM1Q9NP62 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
GCM1Q9NP62 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.4■□□□□ 0.22
GCM1Q9NP62 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
GCM1Q9NP62 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GCM1Q9NP62 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
GCM1Q9NP62 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GCM1Q9NP62 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.4■□□□□ 0.22
GCM1Q9NP62 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
GCM1Q9NP62 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.4■□□□□ 0.22
GCM1Q9NP62 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GCM1Q9NP62 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.4■□□□□ 0.22
GCM1Q9NP62 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GCM1Q9NP62 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
GCM1Q9NP62 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
GCM1Q9NP62 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
GCM1Q9NP62 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
GCM1Q9NP62 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GCM1Q9NP62 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.39■□□□□ 0.21
GCM1Q9NP62 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GCM1Q9NP62 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GCM1Q9NP62 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GCM1Q9NP62 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.39■□□□□ 0.21
GCM1Q9NP62 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.39■□□□□ 0.21
GCM1Q9NP62 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
GCM1Q9NP62 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GCM1Q9NP62 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GCM1Q9NP62 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
GCM1Q9NP62 SNORA78-201ENST00000459373 127 ntBASIC16.39■□□□□ 0.21
GCM1Q9NP62 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
GCM1Q9NP62 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.39■□□□□ 0.21
GCM1Q9NP62 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.39■□□□□ 0.21
GCM1Q9NP62 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.39■□□□□ 0.21
GCM1Q9NP62 RNF165-205ENST00000588679 2904 ntBASIC16.39■□□□□ 0.21
GCM1Q9NP62 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
GCM1Q9NP62 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GCM1Q9NP62 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.39■□□□□ 0.21
GCM1Q9NP62 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.39■□□□□ 0.21
GCM1Q9NP62 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
GCM1Q9NP62 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.39■□□□□ 0.21
GCM1Q9NP62 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
GCM1Q9NP62 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
GCM1Q9NP62 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GCM1Q9NP62 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCM1Q9NP62 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.38■□□□□ 0.21
GCM1Q9NP62 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCM1Q9NP62 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.38■□□□□ 0.21
GCM1Q9NP62 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCM1Q9NP62 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GCM1Q9NP62 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCM1Q9NP62 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCM1Q9NP62 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GCM1Q9NP62 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.38■□□□□ 0.21
GCM1Q9NP62 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCM1Q9NP62 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCM1Q9NP62 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GCM1Q9NP62 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
GCM1Q9NP62 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
GCM1Q9NP62 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.38■□□□□ 0.21
GCM1Q9NP62 TSPY7P-201ENST00000431358 1114 ntBASIC16.38■□□□□ 0.21
GCM1Q9NP62 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCM1Q9NP62 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.38■□□□□ 0.21
GCM1Q9NP62 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.38■□□□□ 0.21
GCM1Q9NP62 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.38■□□□□ 0.21
GCM1Q9NP62 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.38■□□□□ 0.21
GCM1Q9NP62 MIR4497-201ENST00000583208 89 ntBASIC16.38■□□□□ 0.21
GCM1Q9NP62 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.38■□□□□ 0.21
GCM1Q9NP62 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
GCM1Q9NP62 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GCM1Q9NP62 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
GCM1Q9NP62 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCM1Q9NP62 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCM1Q9NP62 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCM1Q9NP62 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
GCM1Q9NP62 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GCM1Q9NP62 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GCM1Q9NP62 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCM1Q9NP62 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCM1Q9NP62 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GCM1Q9NP62 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
GCM1Q9NP62 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GCM1Q9NP62 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GCM1Q9NP62 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCM1Q9NP62 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GCM1Q9NP62 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.37■□□□□ 0.21
GCM1Q9NP62 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
GCM1Q9NP62 AL158211.5-201ENST00000623583 2518 ntBASIC16.37■□□□□ 0.21
GCM1Q9NP62 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCM1Q9NP62 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.37■□□□□ 0.21
GCM1Q9NP62 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GCM1Q9NP62 AL596275.1-201ENST00000423464 877 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms