Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
CD248Q9HCU0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CD248Q9HCU0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CD248Q9HCU0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD248Q9HCU0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD248Q9HCU0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CD248Q9HCU0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.13■□□□□ 0.81
CD248Q9HCU0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.13■□□□□ 0.81
CD248Q9HCU0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.13■□□□□ 0.81
CD248Q9HCU0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CD248Q9HCU0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.12■□□□□ 0.81
CD248Q9HCU0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.12■□□□□ 0.81
CD248Q9HCU0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.12■□□□□ 0.81
CD248Q9HCU0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CD248Q9HCU0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.12■□□□□ 0.81
CD248Q9HCU0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.12■□□□□ 0.81
CD248Q9HCU0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CD248Q9HCU0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CD248Q9HCU0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD248Q9HCU0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD248Q9HCU0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD248Q9HCU0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD248Q9HCU0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD248Q9HCU0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.12■□□□□ 0.81
CD248Q9HCU0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.12■□□□□ 0.81
CD248Q9HCU0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.12■□□□□ 0.81
CD248Q9HCU0 AL031963.3-201ENST00000606441 850 ntBASIC20.12■□□□□ 0.81
CD248Q9HCU0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD248Q9HCU0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD248Q9HCU0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD248Q9HCU0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD248Q9HCU0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.12■□□□□ 0.81
CD248Q9HCU0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD248Q9HCU0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.12■□□□□ 0.81
CD248Q9HCU0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
CD248Q9HCU0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.12■□□□□ 0.81
CD248Q9HCU0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CD248Q9HCU0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD248Q9HCU0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.11■□□□□ 0.81
CD248Q9HCU0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD248Q9HCU0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CD248Q9HCU0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD248Q9HCU0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD248Q9HCU0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD248Q9HCU0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD248Q9HCU0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD248Q9HCU0 HLA-G-202ENST00000376815 851 ntBASIC20.11■□□□□ 0.81
CD248Q9HCU0 HLA-G-203ENST00000376818 1127 ntBASIC20.11■□□□□ 0.81
CD248Q9HCU0 AL355355.2-201ENST00000442321 338 ntBASIC20.11■□□□□ 0.81
CD248Q9HCU0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD248Q9HCU0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.11■□□□□ 0.81
CD248Q9HCU0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.11■□□□□ 0.81
CD248Q9HCU0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.11■□□□□ 0.81
CD248Q9HCU0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.11■□□□□ 0.81
CD248Q9HCU0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.11■□□□□ 0.81
CD248Q9HCU0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD248Q9HCU0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD248Q9HCU0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CD248Q9HCU0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD248Q9HCU0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD248Q9HCU0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
CD248Q9HCU0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD248Q9HCU0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.11■□□□□ 0.81
CD248Q9HCU0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CD248Q9HCU0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD248Q9HCU0 KRT8P20-201ENST00000423953 1409 ntBASIC20.1■□□□□ 0.81
CD248Q9HCU0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD248Q9HCU0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.1■□□□□ 0.81
CD248Q9HCU0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CD248Q9HCU0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD248Q9HCU0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CD248Q9HCU0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.1■□□□□ 0.81
CD248Q9HCU0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD248Q9HCU0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CD248Q9HCU0 NUDT16P1-203ENST00000513809 620 ntBASIC20.1■□□□□ 0.81
CD248Q9HCU0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.1■□□□□ 0.81
CD248Q9HCU0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.1■□□□□ 0.81
CD248Q9HCU0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD248Q9HCU0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.1■□□□□ 0.81
CD248Q9HCU0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.1■□□□□ 0.81
CD248Q9HCU0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.1■□□□□ 0.81
CD248Q9HCU0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.1■□□□□ 0.81
CD248Q9HCU0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.1■□□□□ 0.81
CD248Q9HCU0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.1■□□□□ 0.81
CD248Q9HCU0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD248Q9HCU0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD248Q9HCU0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.1■□□□□ 0.81
CD248Q9HCU0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD248Q9HCU0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.1■□□□□ 0.81
CD248Q9HCU0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD248Q9HCU0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.1■□□□□ 0.81
CD248Q9HCU0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD248Q9HCU0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD248Q9HCU0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.09■□□□□ 0.81
CD248Q9HCU0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
CD248Q9HCU0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CD248Q9HCU0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD248Q9HCU0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CD248Q9HCU0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
CD248Q9HCU0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms