Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 AC091390.4-202ENST00000476426 537 ntBASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 FP700111.2-201ENST00000619190 1892 ntBASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CPNE5Q9HCH3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 RNF152P1-201ENST00000397754 604 ntBASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 FAM8A6P-201ENST00000407496 1135 ntBASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 B3GAT3P1-201ENST00000471720 806 ntBASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 AC093458.2-201ENST00000623150 629 ntBASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.52■□□□□ 0.56
CPNE5Q9HCH3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE5Q9HCH3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
CPNE5Q9HCH3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE5Q9HCH3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE5Q9HCH3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE5Q9HCH3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE5Q9HCH3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE5Q9HCH3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CPNE5Q9HCH3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CPNE5Q9HCH3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 DUSP5P1-201ENST00000441325 1139 ntBASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE5Q9HCH3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE5Q9HCH3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.5■□□□□ 0.55
CPNE5Q9HCH3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE5Q9HCH3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE5Q9HCH3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE5Q9HCH3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE5Q9HCH3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.5■□□□□ 0.55
CPNE5Q9HCH3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE5Q9HCH3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms