Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRTM1Q9HBL6 AC138932.1-201ENST00000534164 6830 ntBASIC18.45■□□□□ 0.54
LRTM1Q9HBL6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LRTM1Q9HBL6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.45■□□□□ 0.54
LRTM1Q9HBL6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRTM1Q9HBL6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRTM1Q9HBL6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LRTM1Q9HBL6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRTM1Q9HBL6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.45■□□□□ 0.54
LRTM1Q9HBL6 HLA-L-209ENST00000420110 1011 ntBASIC18.45■□□□□ 0.54
LRTM1Q9HBL6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.45■□□□□ 0.54
LRTM1Q9HBL6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.45■□□□□ 0.54
LRTM1Q9HBL6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRTM1Q9HBL6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRTM1Q9HBL6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRTM1Q9HBL6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LRTM1Q9HBL6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM1Q9HBL6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
LRTM1Q9HBL6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRTM1Q9HBL6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRTM1Q9HBL6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
LRTM1Q9HBL6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.43■□□□□ 0.54
LRTM1Q9HBL6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRTM1Q9HBL6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRTM1Q9HBL6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRTM1Q9HBL6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRTM1Q9HBL6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
LRTM1Q9HBL6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.43■□□□□ 0.54
LRTM1Q9HBL6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.43■□□□□ 0.54
LRTM1Q9HBL6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.43■□□□□ 0.54
LRTM1Q9HBL6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRTM1Q9HBL6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
LRTM1Q9HBL6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.43■□□□□ 0.54
LRTM1Q9HBL6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRTM1Q9HBL6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRTM1Q9HBL6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRTM1Q9HBL6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRTM1Q9HBL6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRTM1Q9HBL6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRTM1Q9HBL6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 POM121L13P-201ENST00000422362 380 ntBASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRTM1Q9HBL6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms