Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 ID1-201ENST00000376105 1233 ntBASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 AC069544.1-201ENST00000609399 999 ntBASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 AC005082.1-201ENST00000413042 2259 ntBASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.65■□□□□ 0.42
RSPO3Q9BXY4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RSPO3Q9BXY4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.64■□□□□ 0.42
RSPO3Q9BXY4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
RSPO3Q9BXY4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 Z98044.1-201ENST00000632503 1764 ntBASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 TSPY23P-201ENST00000440136 739 ntBASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 AP003097.1-201ENST00000530657 1135 ntBASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.64■□□□□ 0.41
RSPO3Q9BXY4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 RNA5SP413-201ENST00000516373 109 ntBASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RSPO3Q9BXY4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.62■□□□□ 0.41
RSPO3Q9BXY4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms