Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RPAP1Q9BWH6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC23.31■■□□□ 1.32
RPAP1Q9BWH6 RCC2P6-201ENST00000526625 1557 ntBASIC23.31■■□□□ 1.32
RPAP1Q9BWH6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RPAP1Q9BWH6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RPAP1Q9BWH6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RPAP1Q9BWH6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
RPAP1Q9BWH6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC23.31■■□□□ 1.32
RPAP1Q9BWH6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RPAP1Q9BWH6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RPAP1Q9BWH6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC23.3■■□□□ 1.32
RPAP1Q9BWH6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RPAP1Q9BWH6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RPAP1Q9BWH6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC23.3■■□□□ 1.32
RPAP1Q9BWH6 AC096733.2-201ENST00000609937 1394 ntBASIC23.3■■□□□ 1.32
RPAP1Q9BWH6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RPAP1Q9BWH6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RPAP1Q9BWH6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RPAP1Q9BWH6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC23.3■■□□□ 1.32
RPAP1Q9BWH6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
RPAP1Q9BWH6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RPAP1Q9BWH6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RPAP1Q9BWH6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RPAP1Q9BWH6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RPAP1Q9BWH6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RPAP1Q9BWH6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RPAP1Q9BWH6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 AC097488.1-201ENST00000507834 756 ntBASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 AP000692.2-201ENST00000608391 879 ntBASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 HLA-A-209ENST00000638375 975 ntBASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
RPAP1Q9BWH6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RPAP1Q9BWH6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC23.28■■□□□ 1.32
RPAP1Q9BWH6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RPAP1Q9BWH6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
RPAP1Q9BWH6 AC104076.2-201ENST00000448912 469 ntBASIC23.28■■□□□ 1.32
RPAP1Q9BWH6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC23.28■■□□□ 1.32
RPAP1Q9BWH6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RPAP1Q9BWH6 AC128688.1-201ENST00000487626 519 ntBASIC23.28■■□□□ 1.32
RPAP1Q9BWH6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC23.28■■□□□ 1.32
RPAP1Q9BWH6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC23.28■■□□□ 1.32
RPAP1Q9BWH6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RPAP1Q9BWH6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC23.28■■□□□ 1.32
RPAP1Q9BWH6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
RPAP1Q9BWH6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RPAP1Q9BWH6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RPAP1Q9BWH6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RPAP1Q9BWH6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RPAP1Q9BWH6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC23.28■■□□□ 1.32
RPAP1Q9BWH6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RPAP1Q9BWH6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
RPAP1Q9BWH6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
RPAP1Q9BWH6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RPAP1Q9BWH6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
RPAP1Q9BWH6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC23.27■■□□□ 1.32
RPAP1Q9BWH6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RPAP1Q9BWH6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
RPAP1Q9BWH6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
RPAP1Q9BWH6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RPAP1Q9BWH6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.27■■□□□ 1.32
RPAP1Q9BWH6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
RPAP1Q9BWH6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
RPAP1Q9BWH6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RPAP1Q9BWH6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
RPAP1Q9BWH6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RPAP1Q9BWH6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RPAP1Q9BWH6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC23.27■■□□□ 1.32
RPAP1Q9BWH6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RPAP1Q9BWH6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RPAP1Q9BWH6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RPAP1Q9BWH6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
RPAP1Q9BWH6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
RPAP1Q9BWH6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.27■■□□□ 1.31
RPAP1Q9BWH6 ECEL1P2-202ENST00000465689 757 ntBASIC23.27■■□□□ 1.31
RPAP1Q9BWH6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.27■■□□□ 1.31
RPAP1Q9BWH6 NTF6B-201ENST00000591913 560 ntBASIC23.27■■□□□ 1.31
RPAP1Q9BWH6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RPAP1Q9BWH6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RPAP1Q9BWH6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC23.26■■□□□ 1.31
RPAP1Q9BWH6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.26■■□□□ 1.31
RPAP1Q9BWH6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RPAP1Q9BWH6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms