Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTP4Q96DX8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
RTP4Q96DX8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.58■□□□□ 0.73
RTP4Q96DX8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.58■□□□□ 0.73
RTP4Q96DX8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.58■□□□□ 0.73
RTP4Q96DX8 Z98044.1-201ENST00000632503 1764 ntBASIC19.58■□□□□ 0.73
RTP4Q96DX8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.58■□□□□ 0.72
RTP4Q96DX8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTP4Q96DX8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.58■□□□□ 0.72
RTP4Q96DX8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.58■□□□□ 0.72
RTP4Q96DX8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.58■□□□□ 0.72
RTP4Q96DX8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTP4Q96DX8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.58■□□□□ 0.72
RTP4Q96DX8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTP4Q96DX8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTP4Q96DX8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTP4Q96DX8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTP4Q96DX8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.58■□□□□ 0.72
RTP4Q96DX8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTP4Q96DX8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RTP4Q96DX8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.58■□□□□ 0.72
RTP4Q96DX8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.58■□□□□ 0.72
RTP4Q96DX8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTP4Q96DX8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTP4Q96DX8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTP4Q96DX8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTP4Q96DX8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RTP4Q96DX8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
RTP4Q96DX8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.57■□□□□ 0.72
RTP4Q96DX8 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.57■□□□□ 0.72
RTP4Q96DX8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTP4Q96DX8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTP4Q96DX8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTP4Q96DX8 RPS2P4-201ENST00000476944 856 ntBASIC19.57■□□□□ 0.72
RTP4Q96DX8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.57■□□□□ 0.72
RTP4Q96DX8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTP4Q96DX8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RTP4Q96DX8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTP4Q96DX8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RTP4Q96DX8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.57■□□□□ 0.72
RTP4Q96DX8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTP4Q96DX8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.57■□□□□ 0.72
RTP4Q96DX8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RTP4Q96DX8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RTP4Q96DX8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.57■□□□□ 0.72
RTP4Q96DX8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.57■□□□□ 0.72
RTP4Q96DX8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RTP4Q96DX8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTP4Q96DX8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTP4Q96DX8 AL512353.2-201ENST00000448759 1962 ntBASIC19.56■□□□□ 0.72
RTP4Q96DX8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTP4Q96DX8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RTP4Q96DX8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.56■□□□□ 0.72
RTP4Q96DX8 TSPY23P-201ENST00000440136 739 ntBASIC19.56■□□□□ 0.72
RTP4Q96DX8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RTP4Q96DX8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.56■□□□□ 0.72
RTP4Q96DX8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.56■□□□□ 0.72
RTP4Q96DX8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.56■□□□□ 0.72
RTP4Q96DX8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.56■□□□□ 0.72
RTP4Q96DX8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RTP4Q96DX8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.56■□□□□ 0.72
RTP4Q96DX8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RTP4Q96DX8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.56■□□□□ 0.72
RTP4Q96DX8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTP4Q96DX8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTP4Q96DX8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.56■□□□□ 0.72
RTP4Q96DX8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTP4Q96DX8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.56■□□□□ 0.72
RTP4Q96DX8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RTP4Q96DX8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTP4Q96DX8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RTP4Q96DX8 KRT8P41-201ENST00000533985 1514 ntBASIC19.56■□□□□ 0.72
RTP4Q96DX8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.55■□□□□ 0.72
RTP4Q96DX8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTP4Q96DX8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTP4Q96DX8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.55■□□□□ 0.72
RTP4Q96DX8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTP4Q96DX8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTP4Q96DX8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTP4Q96DX8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.55■□□□□ 0.72
RTP4Q96DX8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RTP4Q96DX8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.55■□□□□ 0.72
RTP4Q96DX8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RTP4Q96DX8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTP4Q96DX8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.55■□□□□ 0.72
RTP4Q96DX8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.55■□□□□ 0.72
RTP4Q96DX8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.55■□□□□ 0.72
RTP4Q96DX8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.55■□□□□ 0.72
RTP4Q96DX8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTP4Q96DX8 AL359736.2-201ENST00000621992 437 ntBASIC19.55■□□□□ 0.72
RTP4Q96DX8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
RTP4Q96DX8 AC083906.6-201ENST00000641366 219 ntBASIC19.55■□□□□ 0.72
RTP4Q96DX8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTP4Q96DX8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTP4Q96DX8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTP4Q96DX8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTP4Q96DX8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.55■□□□□ 0.72
RTP4Q96DX8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.55■□□□□ 0.72
RTP4Q96DX8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTP4Q96DX8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms