Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTCD2Q8WV60 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTCD2Q8WV60 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTCD2Q8WV60 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTCD2Q8WV60 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PTCD2Q8WV60 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.42■□□□□ 0.7
PTCD2Q8WV60 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCD2Q8WV60 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PTCD2Q8WV60 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCD2Q8WV60 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCD2Q8WV60 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PTCD2Q8WV60 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.42■□□□□ 0.7
PTCD2Q8WV60 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.42■□□□□ 0.7
PTCD2Q8WV60 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.42■□□□□ 0.7
PTCD2Q8WV60 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTCD2Q8WV60 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.42■□□□□ 0.7
PTCD2Q8WV60 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.42■□□□□ 0.7
PTCD2Q8WV60 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTCD2Q8WV60 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCD2Q8WV60 SDHAP1-207ENST00000440850 2000 ntBASIC19.42■□□□□ 0.7
PTCD2Q8WV60 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTCD2Q8WV60 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 AC004264.1-201ENST00000608354 794 ntBASIC19.4■□□□□ 0.7
PTCD2Q8WV60 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PTCD2Q8WV60 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTCD2Q8WV60 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTCD2Q8WV60 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTCD2Q8WV60 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTCD2Q8WV60 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCD2Q8WV60 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.39■□□□□ 0.69
PTCD2Q8WV60 AL161938.1-201ENST00000569833 2180 ntBASIC19.39■□□□□ 0.69
PTCD2Q8WV60 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCD2Q8WV60 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCD2Q8WV60 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCD2Q8WV60 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCD2Q8WV60 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTCD2Q8WV60 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.39■□□□□ 0.69
PTCD2Q8WV60 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCD2Q8WV60 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTCD2Q8WV60 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.39■□□□□ 0.69
PTCD2Q8WV60 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.39■□□□□ 0.69
PTCD2Q8WV60 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.39■□□□□ 0.69
PTCD2Q8WV60 RN7SL602P-201ENST00000578326 324 ntBASIC19.39■□□□□ 0.69
PTCD2Q8WV60 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.39■□□□□ 0.69
PTCD2Q8WV60 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTCD2Q8WV60 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms