Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB3IL1Q8TBN0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB3IL1Q8TBN0 AC007613.1-201ENST00000572811 2597 ntBASIC19.13■□□□□ 0.65
RAB3IL1Q8TBN0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
RAB3IL1Q8TBN0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB3IL1Q8TBN0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB3IL1Q8TBN0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RAB3IL1Q8TBN0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RAB3IL1Q8TBN0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAB3IL1Q8TBN0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB3IL1Q8TBN0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAB3IL1Q8TBN0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB3IL1Q8TBN0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RAB3IL1Q8TBN0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB3IL1Q8TBN0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.12■□□□□ 0.65
RAB3IL1Q8TBN0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB3IL1Q8TBN0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB3IL1Q8TBN0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.12■□□□□ 0.65
RAB3IL1Q8TBN0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.12■□□□□ 0.65
RAB3IL1Q8TBN0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB3IL1Q8TBN0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.12■□□□□ 0.65
RAB3IL1Q8TBN0 AC034268.1-201ENST00000441047 882 ntBASIC19.12■□□□□ 0.65
RAB3IL1Q8TBN0 C2orf69P4-201ENST00000565394 541 ntBASIC19.12■□□□□ 0.65
RAB3IL1Q8TBN0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB3IL1Q8TBN0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RAB3IL1Q8TBN0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB3IL1Q8TBN0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RAB3IL1Q8TBN0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 BICD1-207ENST00000551848 1962 ntBASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3IL1Q8TBN0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 KRT18P11-201ENST00000435214 1283 ntBASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3IL1Q8TBN0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3IL1Q8TBN0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms