Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 NT5C3AP1-201ENST00000394500 1012 ntBASIC14.35□□□□□ -0.11
NUP35Q8NFH5 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
NUP35Q8NFH5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 AC099398.1-201ENST00000567919 2776 ntBASIC14.34□□□□□ -0.11
NUP35Q8NFH5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 KRT18P20-201ENST00000548986 1279 ntBASIC14.34□□□□□ -0.11
NUP35Q8NFH5 AP001160.3-201ENST00000601484 763 ntBASIC14.34□□□□□ -0.11
NUP35Q8NFH5 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 ESPNP-201ENST00000270691 2015 ntBASIC14.34□□□□□ -0.11
NUP35Q8NFH5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NUP35Q8NFH5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NUP35Q8NFH5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.33□□□□□ -0.11
NUP35Q8NFH5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
NUP35Q8NFH5 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NUP35Q8NFH5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
NUP35Q8NFH5 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NUP35Q8NFH5 ZNF815P-204ENST00000434898 1737 ntBASIC14.33□□□□□ -0.12
NUP35Q8NFH5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 HLA-G-202ENST00000376815 851 ntBASIC14.33□□□□□ -0.12
NUP35Q8NFH5 HLA-G-203ENST00000376818 1127 ntBASIC14.33□□□□□ -0.12
NUP35Q8NFH5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 AC131281.2-201ENST00000520478 145 ntBASIC14.33□□□□□ -0.12
NUP35Q8NFH5 AC027682.1-201ENST00000562846 899 ntBASIC14.33□□□□□ -0.12
NUP35Q8NFH5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NUP35Q8NFH5 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 CYP21A1P-202ENST00000354927 1481 ntBASIC14.32□□□□□ -0.12
NUP35Q8NFH5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NUP35Q8NFH5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms