Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.71■■□□□ 1.07
RETREG2Q8NC44 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
RETREG2Q8NC44 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RETREG2Q8NC44 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.71■■□□□ 1.07
RETREG2Q8NC44 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RETREG2Q8NC44 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.71■■□□□ 1.07
RETREG2Q8NC44 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RETREG2Q8NC44 AC011506.1-201ENST00000474329 610 ntBASIC21.71■■□□□ 1.07
RETREG2Q8NC44 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RETREG2Q8NC44 WWOX-216ENST00000569818 525 ntBASIC21.71■■□□□ 1.07
RETREG2Q8NC44 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RETREG2Q8NC44 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RETREG2Q8NC44 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RETREG2Q8NC44 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RETREG2Q8NC44 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RETREG2Q8NC44 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RETREG2Q8NC44 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RETREG2Q8NC44 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RETREG2Q8NC44 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RETREG2Q8NC44 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RETREG2Q8NC44 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.71■■□□□ 1.07
RETREG2Q8NC44 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.7■■□□□ 1.07
RETREG2Q8NC44 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RETREG2Q8NC44 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RETREG2Q8NC44 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RETREG2Q8NC44 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RETREG2Q8NC44 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
RETREG2Q8NC44 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RETREG2Q8NC44 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RETREG2Q8NC44 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.68■■□□□ 1.06
RETREG2Q8NC44 AC004980.1-204ENST00000429707 299 ntBASIC21.68■■□□□ 1.06
RETREG2Q8NC44 BX664615.1-201ENST00000443558 458 ntBASIC21.68■■□□□ 1.06
RETREG2Q8NC44 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.68■■□□□ 1.06
RETREG2Q8NC44 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.68■■□□□ 1.06
RETREG2Q8NC44 LINC01238-205ENST00000567549 1107 ntBASIC21.68■■□□□ 1.06
RETREG2Q8NC44 SLC25A1P4-201ENST00000567977 778 ntBASIC21.68■■□□□ 1.06
RETREG2Q8NC44 AC006011.2-201ENST00000621313 1158 ntBASIC21.68■■□□□ 1.06
RETREG2Q8NC44 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.68■■□□□ 1.06
RETREG2Q8NC44 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RETREG2Q8NC44 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RETREG2Q8NC44 AC093484.2-201ENST00000580996 2166 ntBASIC21.68■■□□□ 1.06
RETREG2Q8NC44 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
RETREG2Q8NC44 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.67■■□□□ 1.06
RETREG2Q8NC44 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RETREG2Q8NC44 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RETREG2Q8NC44 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms