Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC89Q8N998 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
CCDC89Q8N998 MYC-209ENST00000641252 345 ntBASIC19.9■□□□□ 0.78
CCDC89Q8N998 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC89Q8N998 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC89Q8N998 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC89Q8N998 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC89Q8N998 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC89Q8N998 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC89Q8N998 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.9■□□□□ 0.78
CCDC89Q8N998 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC89Q8N998 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC89Q8N998 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC89Q8N998 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
CCDC89Q8N998 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC89Q8N998 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC89Q8N998 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC89Q8N998 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC89Q8N998 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CCDC89Q8N998 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC89Q8N998 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC89Q8N998 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC89Q8N998 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC89Q8N998 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC89Q8N998 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC89Q8N998 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC89Q8N998 KRT8P8-201ENST00000434750 1448 ntBASIC19.89■□□□□ 0.77
CCDC89Q8N998 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC89Q8N998 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.89■□□□□ 0.77
CCDC89Q8N998 AC060766.5-201ENST00000590539 871 ntBASIC19.89■□□□□ 0.77
CCDC89Q8N998 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
CCDC89Q8N998 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC89Q8N998 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CCDC89Q8N998 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC89Q8N998 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC89Q8N998 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC89Q8N998 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC89Q8N998 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC89Q8N998 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC89Q8N998 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCDC89Q8N998 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC89Q8N998 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CCDC89Q8N998 AC104417.2-201ENST00000562989 1793 ntBASIC19.88■□□□□ 0.77
CCDC89Q8N998 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC89Q8N998 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC89Q8N998 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC89Q8N998 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC89Q8N998 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC89Q8N998 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC89Q8N998 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC89Q8N998 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC89Q8N998 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC89Q8N998 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC89Q8N998 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC89Q8N998 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC89Q8N998 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC89Q8N998 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.88■□□□□ 0.77
CCDC89Q8N998 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC89Q8N998 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
CCDC89Q8N998 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC89Q8N998 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC89Q8N998 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CCDC89Q8N998 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC89Q8N998 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC89Q8N998 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC89Q8N998 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC89Q8N998 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC89Q8N998 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC89Q8N998 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC89Q8N998 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC89Q8N998 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC89Q8N998 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC89Q8N998 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC89Q8N998 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC89Q8N998 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC89Q8N998 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC89Q8N998 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.87■□□□□ 0.77
CCDC89Q8N998 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC89Q8N998 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC89Q8N998 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC89Q8N998 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC89Q8N998 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.87■□□□□ 0.77
CCDC89Q8N998 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC89Q8N998 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC89Q8N998 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
CCDC89Q8N998 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC89Q8N998 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC89Q8N998 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.87■□□□□ 0.77
CCDC89Q8N998 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCDC89Q8N998 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
CCDC89Q8N998 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC89Q8N998 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC89Q8N998 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC89Q8N998 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC89Q8N998 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC89Q8N998 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC89Q8N998 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC89Q8N998 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC89Q8N998 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC89Q8N998 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms