Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 C1QL1P1-201ENST00000568105 661 ntBASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LSMEM1Q8N8F7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSMEM1Q8N8F7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 FP475955.4-201ENST00000623131 1990 ntBASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 FZD10-202ENST00000539839 3282 ntBASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSMEM1Q8N8F7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 AL049812.1-201ENST00000432563 2267 ntBASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 AC093503.3-201ENST00000624917 2352 ntBASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.54■□□□□ 0.4
LSMEM1Q8N8F7 AC004408.2-201ENST00000623613 2777 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms