Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.57■□□□□ 0.08
LINC00311Q8N616 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.57■□□□□ 0.08
LINC00311Q8N616 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LINC00311Q8N616 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.56■□□□□ 0.08
LINC00311Q8N616 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00311Q8N616 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00311Q8N616 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
LINC00311Q8N616 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00311Q8N616 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LINC00311Q8N616 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00311Q8N616 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00311Q8N616 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.56■□□□□ 0.08
LINC00311Q8N616 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00311Q8N616 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.56■□□□□ 0.08
LINC00311Q8N616 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00311Q8N616 AC004951.3-201ENST00000418645 1148 ntBASIC15.56■□□□□ 0.08
LINC00311Q8N616 AC012618.2-201ENST00000428058 849 ntBASIC15.56■□□□□ 0.08
LINC00311Q8N616 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.56■□□□□ 0.08
LINC00311Q8N616 PRSS44-201ENST00000515154 1146 ntBASIC15.56■□□□□ 0.08
LINC00311Q8N616 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.56■□□□□ 0.08
LINC00311Q8N616 AP001412.1-201ENST00000608405 714 ntBASIC15.56■□□□□ 0.08
LINC00311Q8N616 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00311Q8N616 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
LINC00311Q8N616 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00311Q8N616 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00311Q8N616 RCC2P6-201ENST00000526625 1557 ntBASIC15.56■□□□□ 0.08
LINC00311Q8N616 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00311Q8N616 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00311Q8N616 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00311Q8N616 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00311Q8N616 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00311Q8N616 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00311Q8N616 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00311Q8N616 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00311Q8N616 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LINC00311Q8N616 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00311Q8N616 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.56■□□□□ 0.08
LINC00311Q8N616 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00311Q8N616 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00311Q8N616 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00311Q8N616 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
LINC00311Q8N616 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00311Q8N616 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00311Q8N616 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.55■□□□□ 0.08
LINC00311Q8N616 AP000974.1-201ENST00000623909 2387 ntBASIC15.55■□□□□ 0.08
LINC00311Q8N616 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.55■□□□□ 0.08
LINC00311Q8N616 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.55■□□□□ 0.08
LINC00311Q8N616 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00311Q8N616 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LINC00311Q8N616 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00311Q8N616 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00311Q8N616 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00311Q8N616 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00311Q8N616 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.55■□□□□ 0.08
LINC00311Q8N616 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00311Q8N616 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00311Q8N616 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00311Q8N616 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00311Q8N616 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
LINC00311Q8N616 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00311Q8N616 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.55■□□□□ 0.08
LINC00311Q8N616 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LINC00311Q8N616 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00311Q8N616 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.55■□□□□ 0.08
LINC00311Q8N616 AL158047.1-201ENST00000445918 881 ntBASIC15.55■□□□□ 0.08
LINC00311Q8N616 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.55■□□□□ 0.08
LINC00311Q8N616 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.55■□□□□ 0.08
LINC00311Q8N616 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.55■□□□□ 0.08
LINC00311Q8N616 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.55■□□□□ 0.08
LINC00311Q8N616 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LINC00311Q8N616 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00311Q8N616 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
LINC00311Q8N616 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00311Q8N616 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00311Q8N616 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00311Q8N616 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00311Q8N616 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LINC00311Q8N616 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00311Q8N616 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00311Q8N616 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC00311Q8N616 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC00311Q8N616 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00311Q8N616 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00311Q8N616 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00311Q8N616 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00311Q8N616 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00311Q8N616 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
LINC00311Q8N616 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC00311Q8N616 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00311Q8N616 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
LINC00311Q8N616 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC00311Q8N616 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC00311Q8N616 AC091390.4-202ENST00000476426 537 ntBASIC15.54■□□□□ 0.08
LINC00311Q8N616 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LINC00311Q8N616 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC00311Q8N616 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC00311Q8N616 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC00311Q8N616 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.54■□□□□ 0.08
LINC00311Q8N616 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00311Q8N616 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms