Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 PPP1R14BP3-201ENST00000509033 445 ntBASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
MRPL55Q7Z7F7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 TSPY6P-201ENST00000448518 926 ntBASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 ABHD17AP6-201ENST00000458502 1044 ntBASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 RPS2P52-201ENST00000469610 820 ntBASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 LINC01465-201ENST00000408887 1940 ntBASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
MRPL55Q7Z7F7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
MRPL55Q7Z7F7 TNXA-203ENST00000507684 2038 ntBASIC12.33□□□□□ -0.43
MRPL55Q7Z7F7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.43
MRPL55Q7Z7F7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 AC106820.2-201ENST00000563775 3264 ntBASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 AP006587.1-201ENST00000534129 1502 ntBASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 PPP1R14BP2-201ENST00000426284 444 ntBASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 NCF1B-203ENST00000435988 1254 ntBASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC12.33□□□□□ -0.44
MRPL55Q7Z7F7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms