Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 CD99P1-205ENST00000527459 561 ntBASIC17.67■□□□□ 0.42
TUBA1AQ71U36 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.67■□□□□ 0.42
TUBA1AQ71U36 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA1AQ71U36 AL133373.2-201ENST00000623187 2828 ntBASIC17.67■□□□□ 0.42
TUBA1AQ71U36 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 AC090164.3-201ENST00000610780 2143 ntBASIC17.66■□□□□ 0.42
TUBA1AQ71U36 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA1AQ71U36 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.65■□□□□ 0.42
TUBA1AQ71U36 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TUBA1AQ71U36 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TUBA1AQ71U36 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TUBA1AQ71U36 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TUBA1AQ71U36 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TUBA1AQ71U36 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBA1AQ71U36 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.64■□□□□ 0.41
TUBA1AQ71U36 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TUBA1AQ71U36 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TUBA1AQ71U36 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.64■□□□□ 0.41
TUBA1AQ71U36 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBA1AQ71U36 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBA1AQ71U36 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.64■□□□□ 0.41
TUBA1AQ71U36 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBA1AQ71U36 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBA1AQ71U36 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBA1AQ71U36 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TUBA1AQ71U36 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms