Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF43Q68DV7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF43Q68DV7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF43Q68DV7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF43Q68DV7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF43Q68DV7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RNF43Q68DV7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF43Q68DV7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF43Q68DV7 TUBB8P6-201ENST00000436895 1288 ntBASIC20.11■□□□□ 0.81
RNF43Q68DV7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF43Q68DV7 NUDT16P1-203ENST00000513809 620 ntBASIC20.11■□□□□ 0.81
RNF43Q68DV7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.11■□□□□ 0.81
RNF43Q68DV7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.11■□□□□ 0.81
RNF43Q68DV7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF43Q68DV7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF43Q68DV7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.11■□□□□ 0.81
RNF43Q68DV7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF43Q68DV7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RNF43Q68DV7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF43Q68DV7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
RNF43Q68DV7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF43Q68DV7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF43Q68DV7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF43Q68DV7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
RNF43Q68DV7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF43Q68DV7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF43Q68DV7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RNF43Q68DV7 AL691432.2-201ENST00000607222 2038 ntBASIC20.1■□□□□ 0.81
RNF43Q68DV7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF43Q68DV7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF43Q68DV7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RNF43Q68DV7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.1■□□□□ 0.81
RNF43Q68DV7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RNF43Q68DV7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF43Q68DV7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
RNF43Q68DV7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.1■□□□□ 0.81
RNF43Q68DV7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF43Q68DV7 AC116562.2-201ENST00000507042 360 ntBASIC20.1■□□□□ 0.81
RNF43Q68DV7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF43Q68DV7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.1■□□□□ 0.81
RNF43Q68DV7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF43Q68DV7 AC005363.2-201ENST00000618631 242 ntBASIC20.1■□□□□ 0.81
RNF43Q68DV7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF43Q68DV7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF43Q68DV7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF43Q68DV7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF43Q68DV7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF43Q68DV7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF43Q68DV7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.1■□□□□ 0.81
RNF43Q68DV7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RNF43Q68DV7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RNF43Q68DV7 LETM1P2-201ENST00000597330 2178 ntBASIC20.1■□□□□ 0.81
RNF43Q68DV7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
RNF43Q68DV7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF43Q68DV7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF43Q68DV7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF43Q68DV7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF43Q68DV7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RNF43Q68DV7 AC026471.1-201ENST00000564629 3026 ntBASIC20.09■□□□□ 0.81
RNF43Q68DV7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF43Q68DV7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.09■□□□□ 0.81
RNF43Q68DV7 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.09■□□□□ 0.81
RNF43Q68DV7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF43Q68DV7 AC026271.3-201ENST00000571884 352 ntBASIC20.09■□□□□ 0.81
RNF43Q68DV7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.09■□□□□ 0.81
RNF43Q68DV7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF43Q68DV7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF43Q68DV7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF43Q68DV7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF43Q68DV7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF43Q68DV7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF43Q68DV7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF43Q68DV7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF43Q68DV7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.08■□□□□ 0.81
RNF43Q68DV7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.08■□□□□ 0.81
RNF43Q68DV7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF43Q68DV7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF43Q68DV7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RNF43Q68DV7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF43Q68DV7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF43Q68DV7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
RNF43Q68DV7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.08■□□□□ 0.81
RNF43Q68DV7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF43Q68DV7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF43Q68DV7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.08■□□□□ 0.81
RNF43Q68DV7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF43Q68DV7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RNF43Q68DV7 MIR6786-201ENST00000616843 113 ntBASIC20.08■□□□□ 0.81
RNF43Q68DV7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.08■□□□□ 0.81
RNF43Q68DV7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.08■□□□□ 0.8
RNF43Q68DV7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.08■□□□□ 0.8
RNF43Q68DV7 KRT16P1-201ENST00000399124 1418 ntBASIC20.08■□□□□ 0.8
RNF43Q68DV7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF43Q68DV7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RNF43Q68DV7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF43Q68DV7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF43Q68DV7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF43Q68DV7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF43Q68DV7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF43Q68DV7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms