Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GABPB1Q06547 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GABPB1Q06547 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.67■□□□□ 0.74
GABPB1Q06547 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GABPB1Q06547 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GABPB1Q06547 AP001271.2-201ENST00000624018 1556 ntBASIC19.67■□□□□ 0.74
GABPB1Q06547 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
GABPB1Q06547 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GABPB1Q06547 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GABPB1Q06547 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GABPB1Q06547 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GABPB1Q06547 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.67■□□□□ 0.74
GABPB1Q06547 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.67■□□□□ 0.74
GABPB1Q06547 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.67■□□□□ 0.74
GABPB1Q06547 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GABPB1Q06547 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.67■□□□□ 0.74
GABPB1Q06547 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GABPB1Q06547 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.67■□□□□ 0.74
GABPB1Q06547 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GABPB1Q06547 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
GABPB1Q06547 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.67■□□□□ 0.74
GABPB1Q06547 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GABPB1Q06547 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPB1Q06547 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
GABPB1Q06547 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPB1Q06547 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPB1Q06547 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPB1Q06547 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPB1Q06547 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPB1Q06547 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.66■□□□□ 0.74
GABPB1Q06547 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPB1Q06547 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPB1Q06547 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.66■□□□□ 0.74
GABPB1Q06547 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPB1Q06547 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GABPB1Q06547 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPB1Q06547 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.66■□□□□ 0.74
GABPB1Q06547 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.66■□□□□ 0.74
GABPB1Q06547 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.66■□□□□ 0.74
GABPB1Q06547 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.66■□□□□ 0.74
GABPB1Q06547 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GABPB1Q06547 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
GABPB1Q06547 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPB1Q06547 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
GABPB1Q06547 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPB1Q06547 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPB1Q06547 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPB1Q06547 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
GABPB1Q06547 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GABPB1Q06547 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GABPB1Q06547 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GABPB1Q06547 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GABPB1Q06547 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
GABPB1Q06547 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GABPB1Q06547 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABPB1Q06547 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABPB1Q06547 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABPB1Q06547 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABPB1Q06547 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABPB1Q06547 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.65■□□□□ 0.74
GABPB1Q06547 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABPB1Q06547 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.65■□□□□ 0.74
GABPB1Q06547 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GABPB1Q06547 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.65■□□□□ 0.74
GABPB1Q06547 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.65■□□□□ 0.74
GABPB1Q06547 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GABPB1Q06547 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABPB1Q06547 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.65■□□□□ 0.74
GABPB1Q06547 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.65■□□□□ 0.74
GABPB1Q06547 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.65■□□□□ 0.74
GABPB1Q06547 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABPB1Q06547 MIR4449-201ENST00000578365 66 ntBASIC19.65■□□□□ 0.74
GABPB1Q06547 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GABPB1Q06547 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GABPB1Q06547 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABPB1Q06547 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.65■□□□□ 0.74
GABPB1Q06547 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.65■□□□□ 0.74
GABPB1Q06547 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABPB1Q06547 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GABPB1Q06547 AL121761.2-201ENST00000598007 1648 ntBASIC19.65■□□□□ 0.74
GABPB1Q06547 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABPB1Q06547 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GABPB1Q06547 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GABPB1Q06547 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
GABPB1Q06547 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
GABPB1Q06547 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.74
GABPB1Q06547 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GABPB1Q06547 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.64■□□□□ 0.73
GABPB1Q06547 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.64■□□□□ 0.73
GABPB1Q06547 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GABPB1Q06547 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GABPB1Q06547 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GABPB1Q06547 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GABPB1Q06547 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
GABPB1Q06547 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GABPB1Q06547 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
GABPB1Q06547 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GABPB1Q06547 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
GABPB1Q06547 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GABPB1Q06547 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms