Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.88■□□□□ 0.93
SNRPFP62306 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SNRPFP62306 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNRPFP62306 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNRPFP62306 AL161938.1-201ENST00000569833 2180 ntBASIC20.88■□□□□ 0.93
SNRPFP62306 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SNRPFP62306 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNRPFP62306 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SNRPFP62306 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.88■□□□□ 0.93
SNRPFP62306 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
SNRPFP62306 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.88■□□□□ 0.93
SNRPFP62306 AC008040.2-201ENST00000461049 708 ntBASIC20.88■□□□□ 0.93
SNRPFP62306 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.88■□□□□ 0.93
SNRPFP62306 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SNRPFP62306 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SNRPFP62306 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNRPFP62306 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNRPFP62306 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SNRPFP62306 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SNRPFP62306 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.87■□□□□ 0.93
SNRPFP62306 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNRPFP62306 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNRPFP62306 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNRPFP62306 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNRPFP62306 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.87■□□□□ 0.93
SNRPFP62306 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNRPFP62306 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SNRPFP62306 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.87■□□□□ 0.93
SNRPFP62306 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SNRPFP62306 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNRPFP62306 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.87■□□□□ 0.93
SNRPFP62306 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SNRPFP62306 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNRPFP62306 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNRPFP62306 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNRPFP62306 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SNRPFP62306 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SNRPFP62306 AL355355.2-201ENST00000442321 338 ntBASIC20.87■□□□□ 0.93
SNRPFP62306 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNRPFP62306 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNRPFP62306 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.87■□□□□ 0.93
SNRPFP62306 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNRPFP62306 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SNRPFP62306 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNRPFP62306 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
SNRPFP62306 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNRPFP62306 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SNRPFP62306 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.87■□□□□ 0.93
SNRPFP62306 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNRPFP62306 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNRPFP62306 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.86■□□□□ 0.93
SNRPFP62306 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SNRPFP62306 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
SNRPFP62306 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNRPFP62306 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SNRPFP62306 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.86■□□□□ 0.93
SNRPFP62306 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.86■□□□□ 0.93
SNRPFP62306 CKBP1-201ENST00000565489 1086 ntBASIC20.86■□□□□ 0.93
SNRPFP62306 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.86■□□□□ 0.93
SNRPFP62306 AC026471.5-201ENST00000615068 467 ntBASIC20.86■□□□□ 0.93
SNRPFP62306 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.86■□□□□ 0.93
SNRPFP62306 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNRPFP62306 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.86■□□□□ 0.93
SNRPFP62306 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNRPFP62306 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNRPFP62306 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SNRPFP62306 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SNRPFP62306 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNRPFP62306 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNRPFP62306 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNRPFP62306 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SNRPFP62306 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNRPFP62306 AC018445.3-201ENST00000624177 1945 ntBASIC20.85■□□□□ 0.93
SNRPFP62306 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.85■□□□□ 0.93
SNRPFP62306 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNRPFP62306 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.85■□□□□ 0.93
SNRPFP62306 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.85■□□□□ 0.93
SNRPFP62306 MIR4785-201ENST00000585005 73 ntBASIC20.85■□□□□ 0.93
SNRPFP62306 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.85■□□□□ 0.93
SNRPFP62306 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.85■□□□□ 0.93
SNRPFP62306 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SNRPFP62306 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SNRPFP62306 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SNRPFP62306 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.85■□□□□ 0.93
SNRPFP62306 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNRPFP62306 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNRPFP62306 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.85■□□□□ 0.93
SNRPFP62306 AC096733.2-201ENST00000609937 1394 ntBASIC20.85■□□□□ 0.93
SNRPFP62306 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNRPFP62306 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SNRPFP62306 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNRPFP62306 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNRPFP62306 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNRPFP62306 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNRPFP62306 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNRPFP62306 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SNRPFP62306 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SNRPFP62306 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNRPFP62306 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNRPFP62306 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms