Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2D3P61077 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2D3P61077 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2D3P61077 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2D3P61077 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC13.64□□□□□ -0.23
UBE2D3P61077 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2D3P61077 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2D3P61077 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.64□□□□□ -0.23
UBE2D3P61077 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.64□□□□□ -0.23
UBE2D3P61077 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2D3P61077 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.64□□□□□ -0.23
UBE2D3P61077 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2D3P61077 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2D3P61077 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC13.64□□□□□ -0.23
UBE2D3P61077 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.64□□□□□ -0.23
UBE2D3P61077 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.64□□□□□ -0.23
UBE2D3P61077 GUSBP6-202ENST00000438529 1198 ntBASIC13.64□□□□□ -0.23
UBE2D3P61077 PPP1R14BP3-201ENST00000509033 445 ntBASIC13.64□□□□□ -0.23
UBE2D3P61077 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.64□□□□□ -0.23
UBE2D3P61077 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC13.64□□□□□ -0.23
UBE2D3P61077 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2D3P61077 MIR4758-201ENST00000577688 71 ntBASIC13.64□□□□□ -0.23
UBE2D3P61077 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.64□□□□□ -0.23
UBE2D3P61077 AL121906.2-201ENST00000621597 723 ntBASIC13.64□□□□□ -0.23
UBE2D3P61077 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
UBE2D3P61077 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.64□□□□□ -0.23
UBE2D3P61077 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2D3P61077 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2D3P61077 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
UBE2D3P61077 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2D3P61077 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13.64□□□□□ -0.23
UBE2D3P61077 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2D3P61077 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2D3P61077 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
UBE2D3P61077 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
UBE2D3P61077 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
UBE2D3P61077 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.64□□□□□ -0.23
UBE2D3P61077 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2D3P61077 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2D3P61077 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
UBE2D3P61077 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.64□□□□□ -0.23
UBE2D3P61077 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2D3P61077 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2D3P61077 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
UBE2D3P61077 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
UBE2D3P61077 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.63□□□□□ -0.23
UBE2D3P61077 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.63□□□□□ -0.23
UBE2D3P61077 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
UBE2D3P61077 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 AC124283.5-201ENST00000624661 1809 ntBASIC13.63□□□□□ -0.23
UBE2D3P61077 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
UBE2D3P61077 MIR935-201ENST00000401179 91 ntBASIC13.63□□□□□ -0.23
UBE2D3P61077 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC13.63□□□□□ -0.23
UBE2D3P61077 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.63□□□□□ -0.23
UBE2D3P61077 NCF1B-203ENST00000435988 1254 ntBASIC13.63□□□□□ -0.23
UBE2D3P61077 TSPY6P-201ENST00000448518 926 ntBASIC13.63□□□□□ -0.23
UBE2D3P61077 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.63□□□□□ -0.23
UBE2D3P61077 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.63□□□□□ -0.23
UBE2D3P61077 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC13.63□□□□□ -0.23
UBE2D3P61077 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.63□□□□□ -0.23
UBE2D3P61077 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC13.63□□□□□ -0.23
UBE2D3P61077 HLA-B-256ENST00000639848 1089 ntBASIC13.63□□□□□ -0.23
UBE2D3P61077 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.63□□□□□ -0.23
UBE2D3P61077 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.63□□□□□ -0.23
UBE2D3P61077 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
UBE2D3P61077 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.63□□□□□ -0.23
UBE2D3P61077 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC13.63□□□□□ -0.23
UBE2D3P61077 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13.63□□□□□ -0.23
UBE2D3P61077 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D3P61077 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D3P61077 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D3P61077 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D3P61077 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D3P61077 AC092368.3-202ENST00000574180 1591 ntBASIC13.62□□□□□ -0.23
UBE2D3P61077 AC018470.1-201ENST00000624790 3129 ntBASIC13.62□□□□□ -0.23
UBE2D3P61077 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.62□□□□□ -0.23
UBE2D3P61077 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D3P61077 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms