Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXCR4P61073 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.49■□□□□ 0.39
CXCR4P61073 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.49■□□□□ 0.39
CXCR4P61073 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CXCR4P61073 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CXCR4P61073 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.49■□□□□ 0.39
CXCR4P61073 AC023632.3-201ENST00000521633 145 ntBASIC17.49■□□□□ 0.39
CXCR4P61073 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.49■□□□□ 0.39
CXCR4P61073 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.49■□□□□ 0.39
CXCR4P61073 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.49■□□□□ 0.39
CXCR4P61073 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CXCR4P61073 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXCR4P61073 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CXCR4P61073 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CXCR4P61073 ANO7L1-203ENST00000602586 1720 ntBASIC17.49■□□□□ 0.39
CXCR4P61073 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXCR4P61073 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXCR4P61073 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.49■□□□□ 0.39
CXCR4P61073 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CXCR4P61073 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXCR4P61073 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 AC068338.2-201ENST00000563278 1430 ntBASIC17.48■□□□□ 0.39
CXCR4P61073 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.48■□□□□ 0.39
CXCR4P61073 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CXCR4P61073 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CXCR4P61073 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.48■□□□□ 0.39
CXCR4P61073 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.48■□□□□ 0.39
CXCR4P61073 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCR4P61073 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.48■□□□□ 0.39
CXCR4P61073 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CXCR4P61073 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CXCR4P61073 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CXCR4P61073 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CXCR4P61073 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CXCR4P61073 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CXCR4P61073 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CXCR4P61073 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.47■□□□□ 0.39
CXCR4P61073 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CXCR4P61073 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.47■□□□□ 0.39
CXCR4P61073 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CXCR4P61073 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CXCR4P61073 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.47■□□□□ 0.39
CXCR4P61073 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CXCR4P61073 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CXCR4P61073 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CXCR4P61073 AC073592.3-201ENST00000625118 1834 ntBASIC17.47■□□□□ 0.39
CXCR4P61073 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.47■□□□□ 0.39
CXCR4P61073 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CXCR4P61073 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCR4P61073 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CXCR4P61073 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.46■□□□□ 0.39
CXCR4P61073 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.46■□□□□ 0.39
CXCR4P61073 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CXCR4P61073 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CXCR4P61073 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CXCR4P61073 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.46■□□□□ 0.39
CXCR4P61073 AC018553.1-201ENST00000616682 1458 ntBASIC17.46■□□□□ 0.39
CXCR4P61073 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CXCR4P61073 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCR4P61073 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CXCR4P61073 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCR4P61073 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CXCR4P61073 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCR4P61073 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CXCR4P61073 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.46■□□□□ 0.39
CXCR4P61073 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.46■□□□□ 0.39
CXCR4P61073 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.46■□□□□ 0.39
CXCR4P61073 CNN2P6-201ENST00000439038 900 ntBASIC17.46■□□□□ 0.39
CXCR4P61073 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.46■□□□□ 0.39
CXCR4P61073 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.46■□□□□ 0.39
CXCR4P61073 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CXCR4P61073 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CXCR4P61073 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CXCR4P61073 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCR4P61073 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCR4P61073 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCR4P61073 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCR4P61073 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms