Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
FOXA3P55318 MTURN-203ENST00000409688 843 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXA3P55318 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXA3P55318 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXA3P55318 AP001160.3-201ENST00000601484 763 ntBASIC14.41□□□□□ -0.1
FOXA3P55318 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXA3P55318 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
FOXA3P55318 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXA3P55318 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXA3P55318 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXA3P55318 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.41□□□□□ -0.1
FOXA3P55318 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXA3P55318 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXA3P55318 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXA3P55318 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXA3P55318 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXA3P55318 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
FOXA3P55318 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXA3P55318 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXA3P55318 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXA3P55318 AC139713.2-201ENST00000641328 2723 ntBASIC14.41□□□□□ -0.1
FOXA3P55318 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
FOXA3P55318 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXA3P55318 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXA3P55318 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
FOXA3P55318 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXA3P55318 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXA3P55318 MKRN4P-201ENST00000444706 1521 ntBASIC14.41□□□□□ -0.1
FOXA3P55318 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
FOXA3P55318 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
FOXA3P55318 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXA3P55318 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
FOXA3P55318 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXA3P55318 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.4□□□□□ -0.1
FOXA3P55318 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.4□□□□□ -0.1
FOXA3P55318 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXA3P55318 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXA3P55318 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXA3P55318 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXA3P55318 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXA3P55318 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXA3P55318 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXA3P55318 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXA3P55318 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXA3P55318 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXA3P55318 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXA3P55318 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC14.4□□□□□ -0.1
FOXA3P55318 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXA3P55318 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC14.4□□□□□ -0.1
FOXA3P55318 GRAMD4P4-201ENST00000613563 1115 ntBASIC14.4□□□□□ -0.1
FOXA3P55318 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
FOXA3P55318 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXA3P55318 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXA3P55318 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXA3P55318 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.4□□□□□ -0.1
FOXA3P55318 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXA3P55318 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
FOXA3P55318 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXA3P55318 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXA3P55318 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXA3P55318 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXA3P55318 FP475955.4-201ENST00000623131 1990 ntBASIC14.4□□□□□ -0.1
FOXA3P55318 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXA3P55318 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
FOXA3P55318 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.11
FOXA3P55318 AC067852.2-201ENST00000590513 2313 ntBASIC14.4□□□□□ -0.11
FOXA3P55318 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXA3P55318 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXA3P55318 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
FOXA3P55318 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXA3P55318 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXA3P55318 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
FOXA3P55318 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXA3P55318 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXA3P55318 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
FOXA3P55318 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXA3P55318 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXA3P55318 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
FOXA3P55318 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXA3P55318 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXA3P55318 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXA3P55318 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
FOXA3P55318 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXA3P55318 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXA3P55318 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC14.39□□□□□ -0.11
FOXA3P55318 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.39□□□□□ -0.11
FOXA3P55318 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
FOXA3P55318 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
FOXA3P55318 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXA3P55318 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXA3P55318 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXA3P55318 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXA3P55318 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXA3P55318 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXA3P55318 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXA3P55318 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC14.39□□□□□ -0.11
FOXA3P55318 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.39□□□□□ -0.11
FOXA3P55318 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXA3P55318 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXA3P55318 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms