Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP1B3P54709 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ATP1B3P54709 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP1B3P54709 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP1B3P54709 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP1B3P54709 AP006587.1-201ENST00000534129 1502 ntBASIC16.64■□□□□ 0.25
ATP1B3P54709 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP1B3P54709 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
ATP1B3P54709 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
ATP1B3P54709 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP1B3P54709 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP1B3P54709 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP1B3P54709 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP1B3P54709 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP1B3P54709 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP1B3P54709 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP1B3P54709 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP1B3P54709 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP1B3P54709 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ATP1B3P54709 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.63■□□□□ 0.25
ATP1B3P54709 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP1B3P54709 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
ATP1B3P54709 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ATP1B3P54709 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
ATP1B3P54709 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP1B3P54709 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP1B3P54709 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP1B3P54709 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP1B3P54709 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP1B3P54709 ZNF815P-204ENST00000434898 1737 ntBASIC16.63■□□□□ 0.25
ATP1B3P54709 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.63■□□□□ 0.25
ATP1B3P54709 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP1B3P54709 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
ATP1B3P54709 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP1B3P54709 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.63■□□□□ 0.25
ATP1B3P54709 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP1B3P54709 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP1B3P54709 PNMA6B-201ENST00000538162 1200 ntBASIC16.63■□□□□ 0.25
ATP1B3P54709 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP1B3P54709 AC060766.5-201ENST00000590539 871 ntBASIC16.63■□□□□ 0.25
ATP1B3P54709 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.63■□□□□ 0.25
ATP1B3P54709 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.63■□□□□ 0.25
ATP1B3P54709 MYC-209ENST00000641252 345 ntBASIC16.63■□□□□ 0.25
ATP1B3P54709 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP1B3P54709 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ATP1B3P54709 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP1B3P54709 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP1B3P54709 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ATP1B3P54709 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ATP1B3P54709 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP1B3P54709 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ATP1B3P54709 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ATP1B3P54709 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ATP1B3P54709 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.62■□□□□ 0.25
ATP1B3P54709 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP1B3P54709 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.62■□□□□ 0.25
ATP1B3P54709 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATP1B3P54709 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP1B3P54709 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP1B3P54709 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.62■□□□□ 0.25
ATP1B3P54709 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
ATP1B3P54709 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP1B3P54709 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP1B3P54709 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP1B3P54709 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP1B3P54709 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP1B3P54709 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.62■□□□□ 0.25
ATP1B3P54709 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.62■□□□□ 0.25
ATP1B3P54709 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP1B3P54709 YBX1P10-201ENST00000444752 975 ntBASIC16.62■□□□□ 0.25
ATP1B3P54709 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATP1B3P54709 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP1B3P54709 AL138781.1-201ENST00000566567 1274 ntBASIC16.62■□□□□ 0.25
ATP1B3P54709 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.62■□□□□ 0.25
ATP1B3P54709 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.62■□□□□ 0.25
ATP1B3P54709 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP1B3P54709 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP1B3P54709 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
ATP1B3P54709 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP1B3P54709 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ATP1B3P54709 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ATP1B3P54709 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP1B3P54709 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
ATP1B3P54709 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
ATP1B3P54709 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP1B3P54709 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP1B3P54709 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP1B3P54709 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ATP1B3P54709 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.61■□□□□ 0.25
ATP1B3P54709 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
ATP1B3P54709 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP1B3P54709 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP1B3P54709 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATP1B3P54709 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATP1B3P54709 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ATP1B3P54709 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ATP1B3P54709 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ATP1B3P54709 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.61■□□□□ 0.25
ATP1B3P54709 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.61■□□□□ 0.25
ATP1B3P54709 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms