Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PMS1P54277 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PMS1P54277 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.12■□□□□ 0.97
PMS1P54277 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PMS1P54277 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.12■□□□□ 0.97
PMS1P54277 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PMS1P54277 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PMS1P54277 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.12■□□□□ 0.97
PMS1P54277 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PMS1P54277 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.12■□□□□ 0.97
PMS1P54277 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.12■□□□□ 0.97
PMS1P54277 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
PMS1P54277 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.12■□□□□ 0.97
PMS1P54277 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PMS1P54277 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.12■□□□□ 0.97
PMS1P54277 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PMS1P54277 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.12■□□□□ 0.97
PMS1P54277 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.12■□□□□ 0.97
PMS1P54277 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PMS1P54277 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PMS1P54277 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PMS1P54277 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PMS1P54277 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PMS1P54277 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PMS1P54277 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.11■□□□□ 0.97
PMS1P54277 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PMS1P54277 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PMS1P54277 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PMS1P54277 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PMS1P54277 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.11■□□□□ 0.97
PMS1P54277 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.11■□□□□ 0.97
PMS1P54277 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
PMS1P54277 MIR4651-201ENST00000582622 73 ntBASIC21.11■□□□□ 0.97
PMS1P54277 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PMS1P54277 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PMS1P54277 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.11■□□□□ 0.97
PMS1P54277 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.11■□□□□ 0.97
PMS1P54277 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
PMS1P54277 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
PMS1P54277 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PMS1P54277 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PMS1P54277 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PMS1P54277 AC104581.1-202ENST00000635932 2618 ntBASIC21.1■□□□□ 0.97
PMS1P54277 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.1■□□□□ 0.97
PMS1P54277 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
PMS1P54277 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.1■□□□□ 0.97
PMS1P54277 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 KRASP1-201ENST00000407852 552 ntBASIC21.1■□□□□ 0.97
PMS1P54277 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.1■□□□□ 0.97
PMS1P54277 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
PMS1P54277 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.1■□□□□ 0.97
PMS1P54277 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.1■□□□□ 0.97
PMS1P54277 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.1■□□□□ 0.97
PMS1P54277 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.1■□□□□ 0.97
PMS1P54277 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.1■□□□□ 0.97
PMS1P54277 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PMS1P54277 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PMS1P54277 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.09■□□□□ 0.97
PMS1P54277 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.09■□□□□ 0.97
PMS1P54277 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS1P54277 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS1P54277 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS1P54277 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS1P54277 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.09■□□□□ 0.97
PMS1P54277 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS1P54277 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
PMS1P54277 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PMS1P54277 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS1P54277 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS1P54277 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS1P54277 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PMS1P54277 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.09■□□□□ 0.97
PMS1P54277 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PMS1P54277 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PMS1P54277 AL160286.2-201ENST00000567150 934 ntBASIC21.09■□□□□ 0.97
PMS1P54277 AC124016.1-201ENST00000609552 612 ntBASIC21.09■□□□□ 0.97
PMS1P54277 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PMS1P54277 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.09■□□□□ 0.97
PMS1P54277 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms