Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF140P52738 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
ZNF140P52738 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ZNF140P52738 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF140P52738 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF140P52738 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
ZNF140P52738 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF140P52738 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF140P52738 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF140P52738 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF140P52738 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF140P52738 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF140P52738 FEM1AP3-201ENST00000403722 1741 ntBASIC19.12■□□□□ 0.65
ZNF140P52738 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF140P52738 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF140P52738 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF140P52738 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF140P52738 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.12■□□□□ 0.65
ZNF140P52738 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.12■□□□□ 0.65
ZNF140P52738 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.12■□□□□ 0.65
ZNF140P52738 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF140P52738 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.12■□□□□ 0.65
ZNF140P52738 AC091390.4-202ENST00000476426 537 ntBASIC19.12■□□□□ 0.65
ZNF140P52738 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF140P52738 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF140P52738 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ZNF140P52738 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.12■□□□□ 0.65
ZNF140P52738 Z99916.2-201ENST00000604037 246 ntBASIC19.12■□□□□ 0.65
ZNF140P52738 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.12■□□□□ 0.65
ZNF140P52738 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF140P52738 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF140P52738 AL049637.2-201ENST00000641778 930 ntBASIC19.12■□□□□ 0.65
ZNF140P52738 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF140P52738 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF140P52738 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF140P52738 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF140P52738 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF140P52738 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ZNF140P52738 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF140P52738 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF140P52738 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ZNF140P52738 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF140P52738 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.11■□□□□ 0.65
ZNF140P52738 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.11■□□□□ 0.65
ZNF140P52738 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF140P52738 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.11■□□□□ 0.65
ZNF140P52738 KRT8P11-201ENST00000409686 1436 ntBASIC19.11■□□□□ 0.65
ZNF140P52738 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ZNF140P52738 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.11■□□□□ 0.65
ZNF140P52738 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.11■□□□□ 0.65
ZNF140P52738 MESTP1-201ENST00000404287 994 ntBASIC19.11■□□□□ 0.65
ZNF140P52738 AC004951.3-201ENST00000418645 1148 ntBASIC19.11■□□□□ 0.65
ZNF140P52738 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF140P52738 AC008040.2-201ENST00000461049 708 ntBASIC19.11■□□□□ 0.65
ZNF140P52738 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.11■□□□□ 0.65
ZNF140P52738 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ZNF140P52738 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.11■□□□□ 0.65
ZNF140P52738 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF140P52738 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF140P52738 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF140P52738 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF140P52738 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.11■□□□□ 0.65
ZNF140P52738 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF140P52738 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ZNF140P52738 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ZNF140P52738 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF140P52738 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.11■□□□□ 0.65
ZNF140P52738 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF140P52738 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF140P52738 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ZNF140P52738 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF140P52738 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF140P52738 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ZNF140P52738 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF140P52738 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF140P52738 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF140P52738 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ZNF140P52738 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.1■□□□□ 0.65
ZNF140P52738 B3GAT3P1-201ENST00000471720 806 ntBASIC19.1■□□□□ 0.65
ZNF140P52738 AC011506.1-201ENST00000474329 610 ntBASIC19.1■□□□□ 0.65
ZNF140P52738 AC008550.1-201ENST00000511500 884 ntBASIC19.1■□□□□ 0.65
ZNF140P52738 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.1■□□□□ 0.65
ZNF140P52738 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.1■□□□□ 0.65
ZNF140P52738 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ZNF140P52738 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.1■□□□□ 0.65
ZNF140P52738 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF140P52738 AC087289.5-201ENST00000586076 3175 ntBASIC19.1■□□□□ 0.65
ZNF140P52738 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF140P52738 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF140P52738 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF140P52738 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.1■□□□□ 0.65
ZNF140P52738 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF140P52738 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
ZNF140P52738 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF140P52738 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.09■□□□□ 0.65
ZNF140P52738 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF140P52738 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF140P52738 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.09■□□□□ 0.65
ZNF140P52738 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF140P52738 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms