Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 PSMC3IP-207ENST00000589505 1244 ntTSL 217.06■□□□□ 0.323e-8■■□□□ 13.5
NCBP2P52298 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.89■□□□□ 0.296e-7■■□□□ 13.5
NCBP2P52298 AGTRAP-211ENST00000494437 976 ntTSL 316.78■□□□□ 0.286e-7■■□□□ 13.5
NCBP2P52298 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.286e-7■■□□□ 13.5
NCBP2P52298 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.236e-7■■□□□ 13.5
NCBP2P52298 AGTRAP-209ENST00000476512 942 ntTSL 316.25■□□□□ 0.196e-7■■□□□ 13.5
NCBP2P52298 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.166e-7■■□□□ 13.5
NCBP2P52298 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.8■□□□□ 0.126e-7■■□□□ 13.5
NCBP2P52298 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.126e-7■■□□□ 13.5
NCBP2P52298 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.113e-8■■□□□ 13.5
NCBP2P52298 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.086e-7■■□□□ 13.5
NCBP2P52298 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.56■□□□□ 0.086e-7■■□□□ 13.5
NCBP2P52298 SMAD2-211ENST00000589877 527 ntTSL 315.18■□□□□ 0.026e-7■■□□□ 13.5
NCBP2P52298 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.026e-7■■□□□ 13.5
NCBP2P52298 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.03■□□□□ -03e-8■■□□□ 13.5
NCBP2P52298 AGTRAP-210ENST00000491346 1116 ntTSL 514.91□□□□□ -0.026e-7■■□□□ 13.5
NCBP2P52298 FZD6-202ENST00000519011 2006 ntTSL 214.76□□□□□ -0.056e-7■■□□□ 13.5
NCBP2P52298 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.086e-7■■□□□ 13.5
NCBP2P52298 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.086e-7■■□□□ 13.5
NCBP2P52298 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.096e-7■■□□□ 13.5
NCBP2P52298 SMAD2-207ENST00000586514 828 ntTSL 514.44□□□□□ -0.16e-7■■□□□ 13.5
NCBP2P52298 UBOX5-203ENST00000449731 524 ntTSL 514.39□□□□□ -0.116e-7■■□□□ 13.5
NCBP2P52298 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.32□□□□□ -0.126e-7■■□□□ 13.5
NCBP2P52298 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.3□□□□□ -0.126e-7■■□□□ 13.5
NCBP2P52298 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.136e-7■■□□□ 13.5
NCBP2P52298 TBC1D8-204ENST00000463469 561 ntTSL 414.23□□□□□ -0.136e-7■■□□□ 13.5
NCBP2P52298 FZD6-207ENST00000523933 1472 ntTSL 514.18□□□□□ -0.146e-7■■□□□ 13.5
NCBP2P52298 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.17□□□□□ -0.146e-7■■□□□ 13.5
NCBP2P52298 SMYD2-204ENST00000471645 4732 ntTSL 1 (best)14.06□□□□□ -0.166e-7■■□□□ 13.5
NCBP2P52298 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.76□□□□□ -0.216e-7■■□□□ 13.5
NCBP2P52298 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.243e-8■■□□□ 13.5
NCBP2P52298 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.38□□□□□ -0.276e-7■■□□□ 13.5
NCBP2P52298 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.36□□□□□ -0.276e-7■■□□□ 13.5
NCBP2P52298 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.31□□□□□ -0.286e-7■■□□□ 13.5
NCBP2P52298 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.14□□□□□ -0.316e-7■■□□□ 13.5
NCBP2P52298 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC12.92□□□□□ -0.343e-8■■□□□ 13.5
NCBP2P52298 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.61□□□□□ -0.396e-7■■□□□ 13.5
NCBP2P52298 SMYD2-206ENST00000491455 3809 ntTSL 212.6□□□□□ -0.396e-7■■□□□ 13.5
NCBP2P52298 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.46e-7■■□□□ 13.5
NCBP2P52298 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.436e-7■■□□□ 13.5
NCBP2P52298 SMAD2-210ENST00000587421 575 ntTSL 412.34□□□□□ -0.436e-7■■□□□ 13.5
NCBP2P52298 EVI5-202ENST00000466778 321 ntTSL 312.31□□□□□ -0.446e-7■■□□□ 13.5
NCBP2P52298 UBOX5-202ENST00000348031 4469 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.476e-7■■□□□ 13.5
NCBP2P52298 TBC1D8-201ENST00000376840 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.56e-7■■□□□ 13.5
NCBP2P52298 MCM4-216ENST00000524086 547 ntTSL 511.42□□□□□ -0.586e-7■■□□□ 13.5
NCBP2P52298 UBOX5-201ENST00000217173 4631 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.596e-7■■□□□ 13.5
NCBP2P52298 NGLY1-214ENST00000493324 3058 ntTSL 211.32□□□□□ -0.66e-7■■□□□ 13.5
NCBP2P52298 MCM4-203ENST00000518221 572 ntTSL 410.39□□□□□ -0.756e-7■■□□□ 13.5
NCBP2P52298 PSMC3IP-203ENST00000586337 747 ntTSL 510.34□□□□□ -0.753e-8■■□□□ 13.5
NCBP2P52298 FZD6-204ENST00000522484 3646 ntTSL 1 (best)9.7□□□□□ -0.866e-7■■□□□ 13.5
NCBP2P52298 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.946e-7■■□□□ 13.5
NCBP2P52298 FZD6-201ENST00000358755 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.976e-7■■□□□ 13.5
NCBP2P52298 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.296e-7■■□□□ 13.5
NCBP2P52298 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.94□□□□□ -1.36e-7■■□□□ 13.5
NCBP2P52298 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.646e-7■■□□□ 13.5
NCBP2P52298 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.786e-7■■□□□ 13.5
NCBP2P52298 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.86e-7■■□□□ 13.5
NCBP2P52298 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.876e-7■■□□□ 13.5
NCBP2P52298 SCAI-204ENST00000468569 546 ntTSL 22.95□□□□□ -1.946e-7■■□□□ 13.5
NCBP2P52298 NGLY1-208ENST00000461491 552 ntTSL 42.12□□□□□ -2.076e-7■■□□□ 13.5
NCBP2P52298 STIL-202ENST00000360380 5225 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.692e-7■■□□□ 13.4
NCBP2P52298 STIL-209ENST00000447475 2984 ntAPPRIS ALT2 TSL 1 (best)7.11□□□□□ -1.272e-7■■□□□ 13.4
NCBP2P52298 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.342e-7■■□□□ 13.4
NCBP2P52298 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.412e-7■■□□□ 13.4
NCBP2P52298 TTC21B-203ENST00000464374 1844 ntTSL 1 (best)6.37□□□□□ -1.395e-8■■□□□ 13.4
NCBP2P52298 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.485e-8■■□□□ 13.4
NCBP2P52298 TTC21B-204ENST00000476227 651 ntTSL 31.1□□□□□ -2.235e-8■■□□□ 13.4
NCBP2P52298 ADNP2-204ENST00000560752 880 ntTSL 525.44■■□□□ 1.667e-9■■□□□ 13.4
NCBP2P52298 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.357e-9■■□□□ 13.4
NCBP2P52298 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.355e-31■■□□□ 13.4
NCBP2P52298 TUBA1B-201ENST00000332858 3198 ntTSL 1 (best)12.67□□□□□ -0.385e-31■■□□□ 13.4
NCBP2P52298 TUBA1B-204ENST00000547765 1875 ntTSL 512.52□□□□□ -0.415e-31■■□□□ 13.4
NCBP2P52298 TUBA1B-208ENST00000552984 574 ntTSL 410.42□□□□□ -0.745e-31■■□□□ 13.4
NCBP2P52298 TUBA1B-203ENST00000547476 584 ntTSL 410.18□□□□□ -0.785e-31■■□□□ 13.4
NCBP2P52298 TUBA1B-207ENST00000551324 840 ntTSL 28.62□□□□□ -1.035e-31■■□□□ 13.4
NCBP2P52298 TUBA1B-206ENST00000550367 835 ntTSL 38.46□□□□□ -1.065e-31■■□□□ 13.4
NCBP2P52298 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.74■□□□□ 0.116e-7■■□□□ 13.4
NCBP2P52298 SULT1A2-201ENST00000335715 1090 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.666e-7■■□□□ 13.4
NCBP2P52298 STIM2-209ENST00000494628 726 ntTSL 512.75□□□□□ -0.371e-7■■□□□ 13.4
NCBP2P52298 CCNL2-216ENST00000488340 1598 ntTSL 220.69■□□□□ 0.96e-16■■□□□ 13.4
NCBP2P52298 CCNL2-205ENST00000425598 661 ntTSL 519.04■□□□□ 0.646e-16■■□□□ 13.4
NCBP2P52298 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.476e-16■■□□□ 13.4
NCBP2P52298 CCNL2-213ENST00000481223 2815 ntTSL 217.45■□□□□ 0.386e-16■■□□□ 13.4
NCBP2P52298 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.4■□□□□ 0.066e-16■■□□□ 13.4
NCBP2P52298 CCNL2-218ENST00000496007 4452 ntTSL 212.92□□□□□ -0.346e-16■■□□□ 13.4
NCBP2P52298 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.35■□□□□ 0.531e-9■■□□□ 13.4
NCBP2P52298 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.31■□□□□ 0.21e-9■■□□□ 13.4
NCBP2P52298 SGCE-208ENST00000450385 815 ntTSL 314.62□□□□□ -0.071e-9■■□□□ 13.4
NCBP2P52298 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.54□□□□□ -0.081e-9■■□□□ 13.4
NCBP2P52298 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.57□□□□□ -0.241e-9■■□□□ 13.4
NCBP2P52298 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.5□□□□□ -0.251e-9■■□□□ 13.4
NCBP2P52298 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.541e-9■■□□□ 13.4
NCBP2P52298 SGCE-203ENST00000425444 597 ntTSL 311.64□□□□□ -0.551e-9■■□□□ 13.4
NCBP2P52298 RAB10-204ENST00000495146 1292 ntTSL 520.7■□□□□ 0.91e-7■■□□□ 13.4
NCBP2P52298 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.481e-7■■□□□ 13.4
NCBP2P52298 LONP1-204ENST00000586617 471 ntTSL 523.48■■□□□ 1.354e-10■■□□□ 13.4
NCBP2P52298 LONP1-210ENST00000590511 722 ntTSL 322.46■■□□□ 1.194e-10■■□□□ 13.4
NCBP2P52298 LONP1-212ENST00000590728 591 ntTSL 422.17■■□□□ 1.144e-10■■□□□ 13.4
NCBP2P52298 LONP1-205ENST00000587365 641 ntTSL 521.87■■□□□ 1.094e-10■■□□□ 13.4
NCBP2P52298 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.43■□□□□ 0.74e-10■■□□□ 13.4
Retrieved 100 of 18,329 protein–RNA pairs in 178.6 ms