Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21■□□□□ 0.95
HOXD13P35453 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXD13P35453 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21■□□□□ 0.95
HOXD13P35453 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
HOXD13P35453 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXD13P35453 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
HOXD13P35453 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXD13P35453 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXD13P35453 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21■□□□□ 0.95
HOXD13P35453 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXD13P35453 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21■□□□□ 0.95
HOXD13P35453 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXD13P35453 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21■□□□□ 0.95
HOXD13P35453 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
HOXD13P35453 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.99■□□□□ 0.95
HOXD13P35453 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXD13P35453 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXD13P35453 TNXA-203ENST00000507684 2038 ntBASIC20.99■□□□□ 0.95
HOXD13P35453 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXD13P35453 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXD13P35453 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.99■□□□□ 0.95
HOXD13P35453 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXD13P35453 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXD13P35453 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXD13P35453 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
HOXD13P35453 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXD13P35453 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.99■□□□□ 0.95
HOXD13P35453 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.99■□□□□ 0.95
HOXD13P35453 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXD13P35453 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXD13P35453 MIR6786-201ENST00000616843 113 ntBASIC20.99■□□□□ 0.95
HOXD13P35453 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXD13P35453 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXD13P35453 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
HOXD13P35453 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXD13P35453 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXD13P35453 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.98■□□□□ 0.95
HOXD13P35453 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXD13P35453 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXD13P35453 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
HOXD13P35453 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXD13P35453 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.98■□□□□ 0.95
HOXD13P35453 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXD13P35453 AC004951.3-201ENST00000418645 1148 ntBASIC20.98■□□□□ 0.95
HOXD13P35453 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.98■□□□□ 0.95
HOXD13P35453 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
HOXD13P35453 AC116562.2-201ENST00000507042 360 ntBASIC20.98■□□□□ 0.95
HOXD13P35453 NUDT16P1-203ENST00000513809 620 ntBASIC20.98■□□□□ 0.95
HOXD13P35453 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.98■□□□□ 0.95
HOXD13P35453 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.98■□□□□ 0.95
HOXD13P35453 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.98■□□□□ 0.95
HOXD13P35453 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.98■□□□□ 0.95
HOXD13P35453 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.98■□□□□ 0.95
HOXD13P35453 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.98■□□□□ 0.95
HOXD13P35453 AC006333.2-201ENST00000607957 2099 ntBASIC20.98■□□□□ 0.95
HOXD13P35453 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.98■□□□□ 0.95
HOXD13P35453 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXD13P35453 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HOXD13P35453 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.97■□□□□ 0.95
HOXD13P35453 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.97■□□□□ 0.95
HOXD13P35453 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HOXD13P35453 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXD13P35453 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXD13P35453 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
HOXD13P35453 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.97■□□□□ 0.95
HOXD13P35453 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.97■□□□□ 0.95
HOXD13P35453 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
HOXD13P35453 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.97■□□□□ 0.95
HOXD13P35453 AC011298.2-201ENST00000617989 482 ntBASIC20.97■□□□□ 0.95
HOXD13P35453 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXD13P35453 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.97■□□□□ 0.95
HOXD13P35453 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.97■□□□□ 0.95
HOXD13P35453 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HOXD13P35453 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HOXD13P35453 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXD13P35453 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXD13P35453 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HOXD13P35453 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXD13P35453 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXD13P35453 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
HOXD13P35453 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
HOXD13P35453 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXD13P35453 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.96■□□□□ 0.95
HOXD13P35453 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.96■□□□□ 0.95
HOXD13P35453 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXD13P35453 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.96■□□□□ 0.95
HOXD13P35453 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.96■□□□□ 0.95
HOXD13P35453 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.96■□□□□ 0.95
HOXD13P35453 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.96■□□□□ 0.95
HOXD13P35453 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.96■□□□□ 0.95
HOXD13P35453 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.96■□□□□ 0.95
HOXD13P35453 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXD13P35453 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXD13P35453 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HOXD13P35453 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.96■□□□□ 0.95
HOXD13P35453 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
HOXD13P35453 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
HOXD13P35453 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
HOXD13P35453 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HOXD13P35453 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms