Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN3P26045 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN3P26045 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN3P26045 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN3P26045 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN3P26045 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN3P26045 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PTPN3P26045 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN3P26045 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN3P26045 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN3P26045 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.57■□□□□ 0.72
PTPN3P26045 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PTPN3P26045 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PTPN3P26045 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN3P26045 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PTPN3P26045 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN3P26045 NIFKP9-201ENST00000419265 221 ntBASIC19.57■□□□□ 0.72
PTPN3P26045 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPN3P26045 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPN3P26045 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPN3P26045 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN3P26045 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPN3P26045 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
PTPN3P26045 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPN3P26045 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PTPN3P26045 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN3P26045 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN3P26045 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPN3P26045 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN3P26045 KRT8P41-201ENST00000533985 1514 ntBASIC19.56■□□□□ 0.72
PTPN3P26045 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN3P26045 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.56■□□□□ 0.72
PTPN3P26045 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPN3P26045 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN3P26045 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN3P26045 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.56■□□□□ 0.72
PTPN3P26045 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN3P26045 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN3P26045 FP475955.4-201ENST00000623131 1990 ntBASIC19.56■□□□□ 0.72
PTPN3P26045 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN3P26045 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.56■□□□□ 0.72
PTPN3P26045 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPN3P26045 Z85996.1-201ENST00000494644 937 ntBASIC19.56■□□□□ 0.72
PTPN3P26045 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.56■□□□□ 0.72
PTPN3P26045 AL353708.3-201ENST00000610272 989 ntBASIC19.56■□□□□ 0.72
PTPN3P26045 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN3P26045 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN3P26045 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN3P26045 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PTPN3P26045 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN3P26045 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPN3P26045 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN3P26045 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPN3P26045 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN3P26045 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN3P26045 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN3P26045 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN3P26045 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN3P26045 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN3P26045 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN3P26045 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN3P26045 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN3P26045 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PTPN3P26045 RPS2P4-201ENST00000476944 856 ntBASIC19.55■□□□□ 0.72
PTPN3P26045 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN3P26045 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PTPN3P26045 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.55■□□□□ 0.72
PTPN3P26045 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.55■□□□□ 0.72
PTPN3P26045 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.55■□□□□ 0.72
PTPN3P26045 FAM197Y4-202ENST00000622692 608 ntBASIC19.55■□□□□ 0.72
PTPN3P26045 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PTPN3P26045 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.55■□□□□ 0.72
PTPN3P26045 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.55■□□□□ 0.72
PTPN3P26045 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN3P26045 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.55■□□□□ 0.72
PTPN3P26045 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN3P26045 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN3P26045 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PTPN3P26045 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.55■□□□□ 0.72
PTPN3P26045 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN3P26045 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PTPN3P26045 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.54■□□□□ 0.72
PTPN3P26045 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN3P26045 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN3P26045 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN3P26045 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN3P26045 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.54■□□□□ 0.72
PTPN3P26045 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.54■□□□□ 0.72
PTPN3P26045 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.54■□□□□ 0.72
PTPN3P26045 AC098590.1-201ENST00000468126 897 ntBASIC19.54■□□□□ 0.72
PTPN3P26045 AP002982.1-201ENST00000492365 877 ntBASIC19.54■□□□□ 0.72
PTPN3P26045 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.54■□□□□ 0.72
PTPN3P26045 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN3P26045 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.54■□□□□ 0.72
PTPN3P26045 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.54■□□□□ 0.72
PTPN3P26045 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN3P26045 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PTPN3P26045 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN3P26045 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN3P26045 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms