Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF1BP20333 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFRSF1BP20333 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF1BP20333 AL121832.2-201ENST00000610979 668 ntBASIC17.83■□□□□ 0.44
TNFRSF1BP20333 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.83■□□□□ 0.44
TNFRSF1BP20333 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
TNFRSF1BP20333 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF1BP20333 AL031598.1-201ENST00000561511 1773 ntBASIC17.83■□□□□ 0.44
TNFRSF1BP20333 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFRSF1BP20333 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.83■□□□□ 0.44
TNFRSF1BP20333 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFRSF1BP20333 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 KRT8P8-201ENST00000434750 1448 ntBASIC17.82■□□□□ 0.44
TNFRSF1BP20333 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 AC092118.2-201ENST00000613495 667 ntBASIC17.82■□□□□ 0.44
TNFRSF1BP20333 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 AC092368.3-202ENST00000574180 1591 ntBASIC17.82■□□□□ 0.44
TNFRSF1BP20333 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.82■□□□□ 0.44
TNFRSF1BP20333 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 GUSBP6-202ENST00000438529 1198 ntBASIC17.81■□□□□ 0.44
TNFRSF1BP20333 AC006970.2-201ENST00000450065 779 ntBASIC17.81■□□□□ 0.44
TNFRSF1BP20333 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.81■□□□□ 0.44
TNFRSF1BP20333 AC005082.1-201ENST00000413042 2259 ntBASIC17.81■□□□□ 0.44
TNFRSF1BP20333 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TNFRSF1BP20333 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TNFRSF1BP20333 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TNFRSF1BP20333 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TNFRSF1BP20333 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFRSF1BP20333 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFRSF1BP20333 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TNFRSF1BP20333 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFRSF1BP20333 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TNFRSF1BP20333 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.8■□□□□ 0.44
TNFRSF1BP20333 YBX1P10-201ENST00000444752 975 ntBASIC17.8■□□□□ 0.44
TNFRSF1BP20333 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.8■□□□□ 0.44
TNFRSF1BP20333 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TNFRSF1BP20333 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TNFRSF1BP20333 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.8■□□□□ 0.44
TNFRSF1BP20333 AC005332.8-201ENST00000622750 2735 ntBASIC17.8■□□□□ 0.44
TNFRSF1BP20333 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TNFRSF1BP20333 AL512353.2-201ENST00000448759 1962 ntBASIC17.8■□□□□ 0.44
TNFRSF1BP20333 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFRSF1BP20333 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFRSF1BP20333 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFRSF1BP20333 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFRSF1BP20333 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFRSF1BP20333 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFRSF1BP20333 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNFRSF1BP20333 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms