Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 CDCA4P2-201ENST00000441182 718 ntBASIC16.85■□□□□ 0.29
ATF1P18846 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.85■□□□□ 0.29
ATF1P18846 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.85■□□□□ 0.29
ATF1P18846 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.85■□□□□ 0.29
ATF1P18846 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.85■□□□□ 0.29
ATF1P18846 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATF1P18846 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATF1P18846 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATF1P18846 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.85■□□□□ 0.29
ATF1P18846 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.85■□□□□ 0.29
ATF1P18846 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATF1P18846 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.85■□□□□ 0.29
ATF1P18846 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATF1P18846 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATF1P18846 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ATF1P18846 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ATF1P18846 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.84■□□□□ 0.29
ATF1P18846 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.84■□□□□ 0.29
ATF1P18846 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
ATF1P18846 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ATF1P18846 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
ATF1P18846 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 AL390719.1-204ENST00000412397 1219 ntBASIC16.84■□□□□ 0.29
ATF1P18846 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.84■□□□□ 0.29
ATF1P18846 AC026185.1-201ENST00000445748 174 ntBASIC16.84■□□□□ 0.29
ATF1P18846 IKBKGP1-201ENST00000612193 1073 ntBASIC16.84■□□□□ 0.29
ATF1P18846 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.84■□□□□ 0.29
ATF1P18846 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 NOC2LP2-201ENST00000407594 1944 ntBASIC16.84■□□□□ 0.29
ATF1P18846 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.84■□□□□ 0.29
ATF1P18846 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
ATF1P18846 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATF1P18846 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATF1P18846 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ATF1P18846 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATF1P18846 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.83■□□□□ 0.29
ATF1P18846 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATF1P18846 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATF1P18846 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATF1P18846 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.83■□□□□ 0.28
ATF1P18846 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.83■□□□□ 0.28
ATF1P18846 MIR663A-201ENST00000385250 93 ntBASIC16.83■□□□□ 0.28
ATF1P18846 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATF1P18846 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ATF1P18846 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ATF1P18846 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
ATF1P18846 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.83■□□□□ 0.28
ATF1P18846 AL512353.2-201ENST00000448759 1962 ntBASIC16.83■□□□□ 0.28
ATF1P18846 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATF1P18846 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.83■□□□□ 0.28
ATF1P18846 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.83■□□□□ 0.28
ATF1P18846 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.83■□□□□ 0.28
ATF1P18846 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.83■□□□□ 0.28
ATF1P18846 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.83■□□□□ 0.28
ATF1P18846 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ATF1P18846 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATF1P18846 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATF1P18846 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.82■□□□□ 0.28
ATF1P18846 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATF1P18846 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATF1P18846 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.82■□□□□ 0.28
ATF1P18846 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATF1P18846 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.82■□□□□ 0.28
ATF1P18846 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATF1P18846 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ATF1P18846 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATF1P18846 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.82■□□□□ 0.28
ATF1P18846 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.82■□□□□ 0.28
ATF1P18846 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATF1P18846 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATF1P18846 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATF1P18846 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ATF1P18846 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ATF1P18846 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.82■□□□□ 0.28
ATF1P18846 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.82■□□□□ 0.28
ATF1P18846 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATF1P18846 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.82■□□□□ 0.28
ATF1P18846 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATF1P18846 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATF1P18846 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms