Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC14.89□□□□□ -0.03
CXCL1P09341 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC14.89□□□□□ -0.03
CXCL1P09341 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CXCL1P09341 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.89□□□□□ -0.03
CXCL1P09341 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL1P09341 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL1P09341 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL1P09341 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CXCL1P09341 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CXCL1P09341 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL1P09341 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL1P09341 AL512353.2-201ENST00000448759 1962 ntBASIC14.89□□□□□ -0.03
CXCL1P09341 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CXCL1P09341 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL1P09341 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL1P09341 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL1P09341 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CXCL1P09341 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC14.89□□□□□ -0.03
CXCL1P09341 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CXCL1P09341 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CXCL1P09341 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CXCL1P09341 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CXCL1P09341 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CXCL1P09341 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
CXCL1P09341 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.88□□□□□ -0.03
CXCL1P09341 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.88□□□□□ -0.03
CXCL1P09341 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.88□□□□□ -0.03
CXCL1P09341 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.88□□□□□ -0.03
CXCL1P09341 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC14.88□□□□□ -0.03
CXCL1P09341 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC14.88□□□□□ -0.03
CXCL1P09341 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.88□□□□□ -0.03
CXCL1P09341 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.88□□□□□ -0.03
CXCL1P09341 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 KRT87P-202ENST00000534226 1464 ntBASIC14.88□□□□□ -0.03
CXCL1P09341 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CXCL1P09341 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.88□□□□□ -0.03
CXCL1P09341 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL1P09341 AC012317.2-201ENST00000623305 2251 ntBASIC14.87□□□□□ -0.03
CXCL1P09341 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CXCL1P09341 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL1P09341 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CXCL1P09341 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL1P09341 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CXCL1P09341 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL1P09341 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL1P09341 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.87□□□□□ -0.03
CXCL1P09341 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL1P09341 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL1P09341 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL1P09341 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CXCL1P09341 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL1P09341 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.87□□□□□ -0.03
CXCL1P09341 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.87□□□□□ -0.03
CXCL1P09341 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.87□□□□□ -0.03
CXCL1P09341 TPRG1LP1-201ENST00000598702 760 ntBASIC14.87□□□□□ -0.03
CXCL1P09341 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC14.87□□□□□ -0.03
CXCL1P09341 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC14.87□□□□□ -0.03
CXCL1P09341 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL1P09341 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.87□□□□□ -0.03
CXCL1P09341 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL1P09341 CICP6-201ENST00000457191 2729 ntBASIC14.87□□□□□ -0.03
CXCL1P09341 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.87□□□□□ -0.03
CXCL1P09341 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CXCL1P09341 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.87□□□□□ -0.03
CXCL1P09341 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL1P09341 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.87□□□□□ -0.03
CXCL1P09341 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL1P09341 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL1P09341 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL1P09341 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL1P09341 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CXCL1P09341 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms