Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.94■□□□□ 0.14
CTSDP07339 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CTSDP07339 AC020916.1-201ENST00000587762 1774 ntBASIC15.94■□□□□ 0.14
CTSDP07339 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.94■□□□□ 0.14
CTSDP07339 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.94■□□□□ 0.14
CTSDP07339 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTSDP07339 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.94■□□□□ 0.14
CTSDP07339 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTSDP07339 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.94■□□□□ 0.14
CTSDP07339 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.94■□□□□ 0.14
CTSDP07339 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
CTSDP07339 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
CTSDP07339 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTSDP07339 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CTSDP07339 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTSDP07339 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CTSDP07339 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CTSDP07339 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTSDP07339 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CTSDP07339 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.94■□□□□ 0.14
CTSDP07339 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CTSDP07339 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CTSDP07339 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.93■□□□□ 0.14
CTSDP07339 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CTSDP07339 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.93■□□□□ 0.14
CTSDP07339 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.93■□□□□ 0.14
CTSDP07339 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.93■□□□□ 0.14
CTSDP07339 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CTSDP07339 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CTSDP07339 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.93■□□□□ 0.14
CTSDP07339 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CTSDP07339 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CTSDP07339 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.93■□□□□ 0.14
CTSDP07339 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CTSDP07339 AC069236.1-201ENST00000604339 616 ntBASIC15.93■□□□□ 0.14
CTSDP07339 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.93■□□□□ 0.14
CTSDP07339 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CTSDP07339 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CTSDP07339 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CTSDP07339 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.93■□□□□ 0.14
CTSDP07339 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.93■□□□□ 0.14
CTSDP07339 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CTSDP07339 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CTSDP07339 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CTSDP07339 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CTSDP07339 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CTSDP07339 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CTSDP07339 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CTSDP07339 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CTSDP07339 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CTSDP07339 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.93■□□□□ 0.14
CTSDP07339 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTSDP07339 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CTSDP07339 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTSDP07339 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CTSDP07339 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.92■□□□□ 0.14
CTSDP07339 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CTSDP07339 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.92■□□□□ 0.14
CTSDP07339 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTSDP07339 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
CTSDP07339 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.92■□□□□ 0.14
CTSDP07339 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTSDP07339 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CTSDP07339 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CTSDP07339 ANO7L1-203ENST00000602586 1720 ntBASIC15.92■□□□□ 0.14
CTSDP07339 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTSDP07339 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTSDP07339 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.92■□□□□ 0.14
CTSDP07339 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC15.92■□□□□ 0.14
CTSDP07339 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CTSDP07339 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.92■□□□□ 0.14
CTSDP07339 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.92■□□□□ 0.14
CTSDP07339 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CTSDP07339 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTSDP07339 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTSDP07339 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTSDP07339 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTSDP07339 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CTSDP07339 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTSDP07339 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTSDP07339 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.92■□□□□ 0.14
CTSDP07339 AC068880.1-201ENST00000507289 2297 ntBASIC15.92■□□□□ 0.14
CTSDP07339 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.92■□□□□ 0.14
CTSDP07339 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
CTSDP07339 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CTSDP07339 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTSDP07339 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTSDP07339 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.91■□□□□ 0.14
CTSDP07339 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTSDP07339 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTSDP07339 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTSDP07339 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.91■□□□□ 0.14
CTSDP07339 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTSDP07339 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CTSDP07339 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.91■□□□□ 0.14
CTSDP07339 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.91■□□□□ 0.14
CTSDP07339 MIR5787-201ENST00000611784 55 ntBASIC15.91■□□□□ 0.14
CTSDP07339 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.91■□□□□ 0.14
CTSDP07339 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CTSDP07339 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms