Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
POLR3DP05423 P4HB-223ENST00000576390 439 ntTSL 4 BASIC22.94■■□□□ 1.26
POLR3DP05423 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
POLR3DP05423 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
POLR3DP05423 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.94■■□□□ 1.26
POLR3DP05423 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC22.94■■□□□ 1.26
POLR3DP05423 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
POLR3DP05423 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
POLR3DP05423 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
POLR3DP05423 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
POLR3DP05423 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
POLR3DP05423 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC22.93■■□□□ 1.26
POLR3DP05423 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
POLR3DP05423 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.93■■□□□ 1.26
POLR3DP05423 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
POLR3DP05423 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
POLR3DP05423 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
POLR3DP05423 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
POLR3DP05423 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC22.93■■□□□ 1.26
POLR3DP05423 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
POLR3DP05423 AC113347.1-201ENST00000413321 391 ntBASIC22.93■■□□□ 1.26
POLR3DP05423 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
POLR3DP05423 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.93■■□□□ 1.26
POLR3DP05423 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.93■■□□□ 1.26
POLR3DP05423 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC22.93■■□□□ 1.26
POLR3DP05423 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
POLR3DP05423 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
POLR3DP05423 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
POLR3DP05423 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.93■■□□□ 1.26
POLR3DP05423 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
POLR3DP05423 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC22.93■■□□□ 1.26
POLR3DP05423 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
POLR3DP05423 KRT8P41-201ENST00000533985 1514 ntBASIC22.92■■□□□ 1.26
POLR3DP05423 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
POLR3DP05423 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC22.92■■□□□ 1.26
POLR3DP05423 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
POLR3DP05423 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.92■■□□□ 1.26
POLR3DP05423 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.92■■□□□ 1.26
POLR3DP05423 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
POLR3DP05423 HIST1H2APS4-201ENST00000362070 348 ntBASIC22.92■■□□□ 1.26
POLR3DP05423 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
POLR3DP05423 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
POLR3DP05423 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC22.92■■□□□ 1.26
POLR3DP05423 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC22.92■■□□□ 1.26
POLR3DP05423 SLC25A3P1-201ENST00000443844 931 ntBASIC22.92■■□□□ 1.26
POLR3DP05423 ECEL1P2-202ENST00000465689 757 ntBASIC22.92■■□□□ 1.26
POLR3DP05423 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC22.92■■□□□ 1.26
POLR3DP05423 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
POLR3DP05423 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.92■■□□□ 1.26
POLR3DP05423 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
POLR3DP05423 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.92■■□□□ 1.26
POLR3DP05423 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
POLR3DP05423 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
POLR3DP05423 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
POLR3DP05423 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
POLR3DP05423 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.91■■□□□ 1.26
POLR3DP05423 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
POLR3DP05423 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC22.91■■□□□ 1.26
POLR3DP05423 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC22.91■■□□□ 1.26
POLR3DP05423 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
POLR3DP05423 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.91■■□□□ 1.26
POLR3DP05423 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC22.91■■□□□ 1.26
POLR3DP05423 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
POLR3DP05423 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC22.91■■□□□ 1.26
POLR3DP05423 AL137013.1-201ENST00000432946 1228 ntBASIC22.91■■□□□ 1.26
POLR3DP05423 AC128688.1-201ENST00000487626 519 ntBASIC22.91■■□□□ 1.26
POLR3DP05423 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC22.91■■□□□ 1.26
POLR3DP05423 AC010331.1-201ENST00000611423 582 ntBASIC22.91■■□□□ 1.26
POLR3DP05423 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
POLR3DP05423 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.91■■□□□ 1.26
POLR3DP05423 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC22.91■■□□□ 1.26
POLR3DP05423 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
POLR3DP05423 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
POLR3DP05423 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.9■■□□□ 1.26
POLR3DP05423 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
POLR3DP05423 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.9■■□□□ 1.26
POLR3DP05423 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
POLR3DP05423 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
POLR3DP05423 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.9■■□□□ 1.26
POLR3DP05423 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
POLR3DP05423 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC22.9■■□□□ 1.26
POLR3DP05423 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
POLR3DP05423 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.9■■□□□ 1.26
POLR3DP05423 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
POLR3DP05423 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
POLR3DP05423 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
POLR3DP05423 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
POLR3DP05423 INGX-201ENST00000359239 846 ntBASIC22.9■■□□□ 1.26
POLR3DP05423 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC22.9■■□□□ 1.26
POLR3DP05423 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
POLR3DP05423 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC22.9■■□□□ 1.26
POLR3DP05423 AC092865.7-201ENST00000641832 219 ntBASIC22.9■■□□□ 1.26
POLR3DP05423 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
POLR3DP05423 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
POLR3DP05423 AC007952.6-201ENST00000573168 2673 ntBASIC22.9■■□□□ 1.26
POLR3DP05423 AC003957.1-201ENST00000625108 2673 ntBASIC22.9■■□□□ 1.26
POLR3DP05423 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
POLR3DP05423 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC22.9■■□□□ 1.26
POLR3DP05423 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
POLR3DP05423 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms