Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CHGBP05060 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
CHGBP05060 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC23.11■■□□□ 1.29
CHGBP05060 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHGBP05060 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHGBP05060 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
CHGBP05060 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHGBP05060 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
CHGBP05060 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHGBP05060 MMP23A-201ENST00000234610 1017 ntBASIC23.1■■□□□ 1.29
CHGBP05060 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CHGBP05060 PTGES2-AS1-201ENST00000443493 2100 ntBASIC23.1■■□□□ 1.29
CHGBP05060 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.1■■□□□ 1.29
CHGBP05060 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC23.1■■□□□ 1.29
CHGBP05060 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC23.1■■□□□ 1.29
CHGBP05060 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
CHGBP05060 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHGBP05060 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHGBP05060 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CHGBP05060 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHGBP05060 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHGBP05060 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC23.09■■□□□ 1.29
CHGBP05060 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CHGBP05060 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHGBP05060 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHGBP05060 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC23.09■■□□□ 1.29
CHGBP05060 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC23.09■■□□□ 1.29
CHGBP05060 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHGBP05060 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHGBP05060 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.09■■□□□ 1.29
CHGBP05060 MFAP1P1-201ENST00000442257 1255 ntBASIC23.09■■□□□ 1.29
CHGBP05060 GLRB-205ENST00000512619 728 ntTSL 3 BASIC23.09■■□□□ 1.29
CHGBP05060 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC23.09■■□□□ 1.29
CHGBP05060 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC23.09■■□□□ 1.29
CHGBP05060 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CHGBP05060 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHGBP05060 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHGBP05060 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHGBP05060 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHGBP05060 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC23.09■■□□□ 1.29
CHGBP05060 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHGBP05060 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC23.09■■□□□ 1.29
CHGBP05060 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHGBP05060 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CHGBP05060 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC23.08■■□□□ 1.29
CHGBP05060 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHGBP05060 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC23.08■■□□□ 1.29
CHGBP05060 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHGBP05060 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHGBP05060 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23.08■■□□□ 1.29
CHGBP05060 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC23.08■■□□□ 1.29
CHGBP05060 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC23.08■■□□□ 1.29
CHGBP05060 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.08■■□□□ 1.29
CHGBP05060 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
CHGBP05060 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.29
CHGBP05060 AC012306.2-201ENST00000609350 630 ntBASIC23.08■■□□□ 1.29
CHGBP05060 AC133561.5-201ENST00000635547 218 ntBASIC23.08■■□□□ 1.29
CHGBP05060 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHGBP05060 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CHGBP05060 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.28
CHGBP05060 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
CHGBP05060 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CHGBP05060 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC23.08■■□□□ 1.28
CHGBP05060 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC23.08■■□□□ 1.28
CHGBP05060 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
CHGBP05060 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CHGBP05060 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CHGBP05060 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
CHGBP05060 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC23.08■■□□□ 1.28
CHGBP05060 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CHGBP05060 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHGBP05060 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHGBP05060 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHGBP05060 AC096733.2-201ENST00000609937 1394 ntBASIC23.07■■□□□ 1.28
CHGBP05060 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHGBP05060 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHGBP05060 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC23.07■■□□□ 1.28
CHGBP05060 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHGBP05060 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23.07■■□□□ 1.28
CHGBP05060 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC23.07■■□□□ 1.28
CHGBP05060 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.07■■□□□ 1.28
CHGBP05060 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC23.07■■□□□ 1.28
CHGBP05060 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC23.07■■□□□ 1.28
CHGBP05060 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHGBP05060 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHGBP05060 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHGBP05060 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CHGBP05060 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHGBP05060 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHGBP05060 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC23.07■■□□□ 1.28
CHGBP05060 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC23.07■■□□□ 1.28
CHGBP05060 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CHGBP05060 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
CHGBP05060 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
CHGBP05060 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CHGBP05060 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHGBP05060 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
CHGBP05060 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC23.06■■□□□ 1.28
CHGBP05060 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CHGBP05060 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms