Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
OPN1SWP03999 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
OPN1SWP03999 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
OPN1SWP03999 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.93■□□□□ 0.46
OPN1SWP03999 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.93■□□□□ 0.46
OPN1SWP03999 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
OPN1SWP03999 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.93■□□□□ 0.46
OPN1SWP03999 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.93■□□□□ 0.46
OPN1SWP03999 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.93■□□□□ 0.46
OPN1SWP03999 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
OPN1SWP03999 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.93■□□□□ 0.46
OPN1SWP03999 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
OPN1SWP03999 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
OPN1SWP03999 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
OPN1SWP03999 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.93■□□□□ 0.46
OPN1SWP03999 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
OPN1SWP03999 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
OPN1SWP03999 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.93■□□□□ 0.46
OPN1SWP03999 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
OPN1SWP03999 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.93■□□□□ 0.46
OPN1SWP03999 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.93■□□□□ 0.46
OPN1SWP03999 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
OPN1SWP03999 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
OPN1SWP03999 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
OPN1SWP03999 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
OPN1SWP03999 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
OPN1SWP03999 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.92■□□□□ 0.46
OPN1SWP03999 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
OPN1SWP03999 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
OPN1SWP03999 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
OPN1SWP03999 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
OPN1SWP03999 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
OPN1SWP03999 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
OPN1SWP03999 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.92■□□□□ 0.46
OPN1SWP03999 GUSBP6-202ENST00000438529 1198 ntBASIC17.92■□□□□ 0.46
OPN1SWP03999 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
OPN1SWP03999 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.92■□□□□ 0.46
OPN1SWP03999 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.92■□□□□ 0.46
OPN1SWP03999 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
OPN1SWP03999 AL121906.2-201ENST00000621597 723 ntBASIC17.92■□□□□ 0.46
OPN1SWP03999 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.92■□□□□ 0.46
OPN1SWP03999 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
OPN1SWP03999 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.92■□□□□ 0.46
OPN1SWP03999 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
OPN1SWP03999 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
OPN1SWP03999 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.92■□□□□ 0.46
OPN1SWP03999 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
OPN1SWP03999 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
OPN1SWP03999 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
OPN1SWP03999 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
OPN1SWP03999 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
OPN1SWP03999 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
OPN1SWP03999 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.92■□□□□ 0.46
OPN1SWP03999 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
OPN1SWP03999 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.91■□□□□ 0.46
OPN1SWP03999 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
OPN1SWP03999 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.91■□□□□ 0.46
OPN1SWP03999 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
OPN1SWP03999 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.91■□□□□ 0.46
OPN1SWP03999 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
OPN1SWP03999 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
OPN1SWP03999 KRT8P8-201ENST00000434750 1448 ntBASIC17.91■□□□□ 0.46
OPN1SWP03999 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
OPN1SWP03999 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.91■□□□□ 0.46
OPN1SWP03999 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
OPN1SWP03999 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
OPN1SWP03999 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.91■□□□□ 0.46
OPN1SWP03999 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
OPN1SWP03999 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
OPN1SWP03999 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
OPN1SWP03999 SLC29A4P1-201ENST00000398760 971 ntBASIC17.91■□□□□ 0.46
OPN1SWP03999 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.91■□□□□ 0.46
OPN1SWP03999 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.91■□□□□ 0.46
OPN1SWP03999 YBX1P10-201ENST00000444752 975 ntBASIC17.91■□□□□ 0.46
OPN1SWP03999 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.91■□□□□ 0.46
OPN1SWP03999 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
OPN1SWP03999 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.91■□□□□ 0.46
OPN1SWP03999 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
OPN1SWP03999 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
OPN1SWP03999 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
OPN1SWP03999 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.91■□□□□ 0.46
OPN1SWP03999 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.91■□□□□ 0.46
OPN1SWP03999 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
OPN1SWP03999 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
OPN1SWP03999 IRX1P1-201ENST00000438849 1838 ntBASIC17.91■□□□□ 0.46
OPN1SWP03999 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
OPN1SWP03999 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
OPN1SWP03999 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
OPN1SWP03999 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
OPN1SWP03999 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
OPN1SWP03999 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
OPN1SWP03999 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
OPN1SWP03999 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
OPN1SWP03999 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
OPN1SWP03999 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
OPN1SWP03999 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
OPN1SWP03999 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
OPN1SWP03999 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.9■□□□□ 0.46
OPN1SWP03999 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.9■□□□□ 0.46
OPN1SWP03999 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 945.5 ms