Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.21■□□□□ 0.18
HLA-AP01891 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.21■□□□□ 0.18
HLA-AP01891 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.21■□□□□ 0.18
HLA-AP01891 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.21■□□□□ 0.18
HLA-AP01891 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-AP01891 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
HLA-AP01891 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-AP01891 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-AP01891 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.2■□□□□ 0.18
HLA-AP01891 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-AP01891 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-AP01891 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.2■□□□□ 0.18
HLA-AP01891 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
HLA-AP01891 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-AP01891 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HLA-AP01891 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-AP01891 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-AP01891 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HLA-AP01891 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HLA-AP01891 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.2■□□□□ 0.18
HLA-AP01891 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-AP01891 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-AP01891 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-AP01891 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.2■□□□□ 0.18
HLA-AP01891 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HLA-AP01891 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.2■□□□□ 0.18
HLA-AP01891 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.2■□□□□ 0.18
HLA-AP01891 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-AP01891 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-AP01891 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HLA-AP01891 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-AP01891 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-AP01891 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-AP01891 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-AP01891 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-AP01891 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-AP01891 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-AP01891 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-AP01891 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
HLA-AP01891 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-AP01891 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-AP01891 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-AP01891 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-AP01891 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-AP01891 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.19■□□□□ 0.18
HLA-AP01891 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-AP01891 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-AP01891 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-AP01891 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-AP01891 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-AP01891 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HLA-AP01891 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-AP01891 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-AP01891 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-AP01891 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-AP01891 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HLA-AP01891 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-AP01891 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-AP01891 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-AP01891 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-AP01891 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-AP01891 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-AP01891 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-AP01891 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
HLA-AP01891 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-AP01891 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-AP01891 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-AP01891 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-AP01891 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-AP01891 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-AP01891 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-AP01891 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-AP01891 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-AP01891 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-AP01891 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
HLA-AP01891 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.18■□□□□ 0.18
HLA-AP01891 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-AP01891 AP001160.3-201ENST00000601484 763 ntBASIC16.18■□□□□ 0.18
HLA-AP01891 MIR5787-201ENST00000611784 55 ntBASIC16.18■□□□□ 0.18
HLA-AP01891 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
HLA-AP01891 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HLA-AP01891 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-AP01891 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-AP01891 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-AP01891 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
HLA-AP01891 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-AP01891 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-AP01891 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-AP01891 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-AP01891 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HLA-AP01891 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-AP01891 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-AP01891 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-AP01891 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-AP01891 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-AP01891 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-AP01891 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-AP01891 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-AP01891 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-AP01891 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms