Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CLPTM1O96005 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLPTM1O96005 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLPTM1O96005 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLPTM1O96005 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.07■□□□□ 0.48
CLPTM1O96005 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLPTM1O96005 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLPTM1O96005 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CLPTM1O96005 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLPTM1O96005 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLPTM1O96005 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLPTM1O96005 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLPTM1O96005 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLPTM1O96005 SLC7A5P2-201ENST00000553010 536 ntBASIC18.07■□□□□ 0.48
CLPTM1O96005 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.07■□□□□ 0.48
CLPTM1O96005 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.07■□□□□ 0.48
CLPTM1O96005 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.07■□□□□ 0.48
CLPTM1O96005 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CLPTM1O96005 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.07■□□□□ 0.48
CLPTM1O96005 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLPTM1O96005 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CLPTM1O96005 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLPTM1O96005 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLPTM1O96005 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLPTM1O96005 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLPTM1O96005 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLPTM1O96005 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
CLPTM1O96005 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLPTM1O96005 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLPTM1O96005 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLPTM1O96005 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CLPTM1O96005 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLPTM1O96005 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.06■□□□□ 0.48
CLPTM1O96005 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLPTM1O96005 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.06■□□□□ 0.48
CLPTM1O96005 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLPTM1O96005 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLPTM1O96005 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CLPTM1O96005 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLPTM1O96005 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLPTM1O96005 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.06■□□□□ 0.48
CLPTM1O96005 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.06■□□□□ 0.48
CLPTM1O96005 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLPTM1O96005 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLPTM1O96005 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLPTM1O96005 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.06■□□□□ 0.48
CLPTM1O96005 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.06■□□□□ 0.48
CLPTM1O96005 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.06■□□□□ 0.48
CLPTM1O96005 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLPTM1O96005 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLPTM1O96005 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.06■□□□□ 0.48
CLPTM1O96005 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLPTM1O96005 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.06■□□□□ 0.48
CLPTM1O96005 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLPTM1O96005 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLPTM1O96005 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.06■□□□□ 0.48
CLPTM1O96005 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.06■□□□□ 0.48
CLPTM1O96005 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLPTM1O96005 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.06■□□□□ 0.48
CLPTM1O96005 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLPTM1O96005 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLPTM1O96005 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CLPTM1O96005 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLPTM1O96005 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CLPTM1O96005 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLPTM1O96005 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.05■□□□□ 0.48
CLPTM1O96005 AC061975.6-201ENST00000579045 1553 ntBASIC18.05■□□□□ 0.48
CLPTM1O96005 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLPTM1O96005 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.05■□□□□ 0.48
CLPTM1O96005 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CLPTM1O96005 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLPTM1O96005 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLPTM1O96005 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLPTM1O96005 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLPTM1O96005 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.05■□□□□ 0.48
CLPTM1O96005 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.05■□□□□ 0.48
CLPTM1O96005 AC008175.2-201ENST00000612840 297 ntBASIC18.05■□□□□ 0.48
CLPTM1O96005 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.05■□□□□ 0.48
CLPTM1O96005 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLPTM1O96005 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLPTM1O96005 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLPTM1O96005 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CLPTM1O96005 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.05■□□□□ 0.48
CLPTM1O96005 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
CLPTM1O96005 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.05■□□□□ 0.48
CLPTM1O96005 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLPTM1O96005 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLPTM1O96005 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLPTM1O96005 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLPTM1O96005 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.05■□□□□ 0.48
CLPTM1O96005 TNRC18P3-201ENST00000441896 2691 ntBASIC18.05■□□□□ 0.48
CLPTM1O96005 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLPTM1O96005 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLPTM1O96005 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.04■□□□□ 0.48
CLPTM1O96005 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.04■□□□□ 0.48
CLPTM1O96005 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLPTM1O96005 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLPTM1O96005 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLPTM1O96005 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.04■□□□□ 0.48
CLPTM1O96005 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms