Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN9O95484 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN9O95484 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CLDN9O95484 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CLDN9O95484 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN9O95484 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN9O95484 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.56■□□□□ 0.56
CLDN9O95484 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN9O95484 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
CLDN9O95484 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.56■□□□□ 0.56
CLDN9O95484 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.56■□□□□ 0.56
CLDN9O95484 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.56■□□□□ 0.56
CLDN9O95484 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN9O95484 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.56■□□□□ 0.56
CLDN9O95484 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.56■□□□□ 0.56
CLDN9O95484 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN9O95484 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN9O95484 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN9O95484 AC006333.2-201ENST00000607957 2099 ntBASIC18.56■□□□□ 0.56
CLDN9O95484 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN9O95484 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CLDN9O95484 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CLDN9O95484 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.55■□□□□ 0.56
CLDN9O95484 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.55■□□□□ 0.56
CLDN9O95484 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN9O95484 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN9O95484 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN9O95484 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.55■□□□□ 0.56
CLDN9O95484 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN9O95484 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
CLDN9O95484 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN9O95484 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN9O95484 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN9O95484 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN9O95484 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN9O95484 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN9O95484 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN9O95484 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.55■□□□□ 0.56
CLDN9O95484 ESRRAP1-201ENST00000400596 1257 ntBASIC18.55■□□□□ 0.56
CLDN9O95484 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.55■□□□□ 0.56
CLDN9O95484 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN9O95484 AL160286.2-201ENST00000567150 934 ntBASIC18.55■□□□□ 0.56
CLDN9O95484 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN9O95484 HLA-A-209ENST00000638375 975 ntBASIC18.55■□□□□ 0.56
CLDN9O95484 AL023875.1-201ENST00000640777 796 ntBASIC18.55■□□□□ 0.56
CLDN9O95484 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN9O95484 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN9O95484 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN9O95484 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN9O95484 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN9O95484 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN9O95484 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN9O95484 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN9O95484 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN9O95484 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN9O95484 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN9O95484 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
CLDN9O95484 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN9O95484 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLDN9O95484 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN9O95484 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN9O95484 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN9O95484 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CLDN9O95484 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
CLDN9O95484 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.54■□□□□ 0.56
CLDN9O95484 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN9O95484 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN9O95484 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDN9O95484 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN9O95484 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN9O95484 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN9O95484 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CLDN9O95484 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDN9O95484 AC239809.2-201ENST00000415381 517 ntBASIC18.54■□□□□ 0.56
CLDN9O95484 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN9O95484 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN9O95484 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN9O95484 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.54■□□□□ 0.56
CLDN9O95484 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CLDN9O95484 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN9O95484 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN9O95484 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLDN9O95484 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN9O95484 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CLDN9O95484 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN9O95484 FEM1AP3-201ENST00000403722 1741 ntBASIC18.54■□□□□ 0.56
CLDN9O95484 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN9O95484 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN9O95484 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CLDN9O95484 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN9O95484 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN9O95484 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN9O95484 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CLDN9O95484 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN9O95484 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN9O95484 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDN9O95484 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CLDN9O95484 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN9O95484 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN9O95484 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms