Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
AP3D1O14617 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP3D1O14617 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
AP3D1O14617 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3D1O14617 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.94■□□□□ 0.46
AP3D1O14617 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP3D1O14617 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
AP3D1O14617 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.94■□□□□ 0.46
AP3D1O14617 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP3D1O14617 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.93■□□□□ 0.46
AP3D1O14617 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
AP3D1O14617 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
AP3D1O14617 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
AP3D1O14617 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.93■□□□□ 0.46
AP3D1O14617 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP3D1O14617 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3D1O14617 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3D1O14617 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3D1O14617 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3D1O14617 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
AP3D1O14617 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.93■□□□□ 0.46
AP3D1O14617 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP3D1O14617 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.93■□□□□ 0.46
AP3D1O14617 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3D1O14617 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.93■□□□□ 0.46
AP3D1O14617 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP3D1O14617 AC120498.8-201ENST00000614275 531 ntBASIC17.93■□□□□ 0.46
AP3D1O14617 LINC01465-201ENST00000408887 1940 ntBASIC17.93■□□□□ 0.46
AP3D1O14617 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3D1O14617 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3D1O14617 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
AP3D1O14617 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3D1O14617 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP3D1O14617 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3D1O14617 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
AP3D1O14617 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3D1O14617 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3D1O14617 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3D1O14617 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3D1O14617 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
AP3D1O14617 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.92■□□□□ 0.46
AP3D1O14617 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
AP3D1O14617 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.92■□□□□ 0.46
AP3D1O14617 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3D1O14617 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.92■□□□□ 0.46
AP3D1O14617 LTB4R2-202ENST00000528054 3092 ntBASIC17.92■□□□□ 0.46
AP3D1O14617 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3D1O14617 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3D1O14617 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP3D1O14617 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3D1O14617 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.92■□□□□ 0.46
AP3D1O14617 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
AP3D1O14617 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP3D1O14617 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.92■□□□□ 0.46
AP3D1O14617 AC008687.6-201ENST00000596318 630 ntBASIC17.92■□□□□ 0.46
AP3D1O14617 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3D1O14617 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
AP3D1O14617 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP3D1O14617 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3D1O14617 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP3D1O14617 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3D1O14617 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.92■□□□□ 0.46
AP3D1O14617 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
AP3D1O14617 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.92■□□□□ 0.46
AP3D1O14617 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
AP3D1O14617 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3D1O14617 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3D1O14617 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3D1O14617 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
AP3D1O14617 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3D1O14617 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3D1O14617 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3D1O14617 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3D1O14617 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3D1O14617 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
AP3D1O14617 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.91■□□□□ 0.46
AP3D1O14617 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3D1O14617 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3D1O14617 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
AP3D1O14617 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP3D1O14617 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3D1O14617 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
AP3D1O14617 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3D1O14617 RNA5SP413-201ENST00000516373 109 ntBASIC17.91■□□□□ 0.46
AP3D1O14617 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.91■□□□□ 0.46
AP3D1O14617 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.91■□□□□ 0.46
AP3D1O14617 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP3D1O14617 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
AP3D1O14617 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3D1O14617 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.91■□□□□ 0.46
AP3D1O14617 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.91■□□□□ 0.46
AP3D1O14617 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3D1O14617 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP3D1O14617 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3D1O14617 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP3D1O14617 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.91■□□□□ 0.46
AP3D1O14617 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3D1O14617 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP3D1O14617 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3D1O14617 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms