Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 AC004687.1-201ENST00000579003 1625 ntBASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC10.68□□□□□ -0.7
CHKB-CPT1BH3BT56 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 AL162377.1-201ENST00000618844 1793 ntBASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 MYB-242ENST00000618728 3545 ntTSL 5 BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 CTBP1-AS2-206ENST00000581398 5652 ntBASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 BID-203ENST00000399765 1879 ntTSL 2 BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC10.67□□□□□ -0.7
CHKB-CPT1BH3BT56 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 FP700111.2-201ENST00000619190 1892 ntBASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 PALM-207ENST00000590161 2137 ntTSL 4 BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
CHKB-CPT1BH3BT56 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC10.65□□□□□ -0.7
CHKB-CPT1BH3BT56 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms