Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC187A0A096LP49 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC187A0A096LP49 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC187A0A096LP49 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC187A0A096LP49 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC187A0A096LP49 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC187A0A096LP49 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC187A0A096LP49 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC187A0A096LP49 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC187A0A096LP49 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC187A0A096LP49 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC187A0A096LP49 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC187A0A096LP49 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC187A0A096LP49 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC187A0A096LP49 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 SPDYE15P-201ENST00000424157 909 ntBASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 ATP5G2P1-201ENST00000433580 426 ntBASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CCDC187A0A096LP49 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC187A0A096LP49 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC187A0A096LP49 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC187A0A096LP49 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC187A0A096LP49 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC187A0A096LP49 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC187A0A096LP49 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC187A0A096LP49 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CCDC187A0A096LP49 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCDC187A0A096LP49 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC187A0A096LP49 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCDC187A0A096LP49 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC187A0A096LP49 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC187A0A096LP49 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC187A0A096LP49 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC187A0A096LP49 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC187A0A096LP49 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC187A0A096LP49 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC187A0A096LP49 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC187A0A096LP49 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC187A0A096LP49 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CCDC187A0A096LP49 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC187A0A096LP49 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC187A0A096LP49 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC187A0A096LP49 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC187A0A096LP49 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC187A0A096LP49 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.16■□□□□ 0.5
CCDC187A0A096LP49 MIR4674-201ENST00000582457 87 ntBASIC18.16■□□□□ 0.5
CCDC187A0A096LP49 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC187A0A096LP49 CR769767.2-201ENST00000622735 460 ntBASIC18.16■□□□□ 0.5
CCDC187A0A096LP49 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC187A0A096LP49 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC187A0A096LP49 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC187A0A096LP49 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC187A0A096LP49 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC187A0A096LP49 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC187A0A096LP49 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CCDC187A0A096LP49 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC187A0A096LP49 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 AC034232.1-201ENST00000506026 1064 ntBASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC187A0A096LP49 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms