Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 SZRD1-202ENST00000401089 3447 ntTSL 2 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 AC136944.2-201ENST00000568752 3971 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 TECPR2-203ENST00000558678 4281 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 UVRAG-207ENST00000531818 3152 ntTSL 2 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 ZFYVE26-207ENST00000555452 7309 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 WDR91-201ENST00000354475 4588 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 SRSF10-204ENST00000344989 3487 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 CDC42SE1-202ENST00000439374 3498 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 SIPA1L2-202ENST00000308942 2937 ntTSL 2 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 ZDHHC6-205ENST00000626395 2906 ntTSL 5 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 ARIH2-201ENST00000356401 4933 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 ZNF43-202ENST00000357491 5249 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 CC2D2A-202ENST00000424120 5249 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 RNU6-1084P-201ENST00000362498 107 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 SNORD36A-201ENST00000362874 73 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 U3.2-201ENST00000362981 210 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 RNU6-778P-201ENST00000363269 103 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 RNA5SP333-201ENST00000363466 118 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 RNA5SP334-201ENST00000364825 118 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 snoU2-30.1-201ENST00000365012 70 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 MIR181C-201ENST00000384881 110 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 IGLV6-57-201ENST00000390285 353 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 SNORA12-201ENST00000391162 147 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 AC090114.1-201ENST00000393266 448 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 RN7SKP125-201ENST00000410481 302 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 FAM183DP-201ENST00000421987 399 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 AC004006.1-201ENST00000434994 377 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 AL109933.2-201ENST00000452651 260 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 Z82173.1-201ENST00000453924 484 ntTSL 3 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 RPS3P1-201ENST00000456781 192 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 RN7SL308P-201ENST00000464971 297 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 RN7SL145P-201ENST00000469955 296 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 RNU7-179P-201ENST00000516608 68 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 RNU6-347P-201ENST00000516658 105 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 MRPL49P2-201ENST00000521066 465 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 MYL6-211ENST00000548580 528 ntTSL 2 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 MYL6-213ENST00000549017 502 ntTSL 3 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 DNAJC19P9-201ENST00000555084 351 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 MIR5089-201ENST00000580047 84 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 SIGLEC31P-201ENST00000594237 551 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 HOTTIP_2.1-201ENST00000616633 376 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 AC245028.3-201ENST00000618197 285 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 PRDM15-202ENST00000398548 6654 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 AL359955.1-201ENST00000455242 3275 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 ARNT-208ENST00000505755 2427 ntTSL 2 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 CLIP1-203ENST00000361654 5568 ntTSL 5 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 AC009487.4-201ENST00000624969 3585 ntBASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 SAG-201ENST00000409110 1591 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 SRGAP2-217ENST00000624873 4705 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 ALG13-225ENST00000621367 3893 ntTSL 2 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 ZNF267-201ENST00000300870 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP4-11Q9BYQ6 VSIG4-204ENST00000455586 2190 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 ZNF423-202ENST00000535559 4201 ntTSL 2 BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 CD22-202ENST00000341773 2755 ntTSL 5 BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 PIEZO2-210ENST00000580640 8334 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 SMLR1-201ENST00000541421 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 BCAR3-204ENST00000370247 2827 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 SLC16A1-AS1-204ENST00000428411 8757 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 TUFT1-203ENST00000368849 3111 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 PAMR1-207ENST00000619888 3142 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 SEC24D-201ENST00000280551 4030 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 CDHR2-203ENST00000506348 4005 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 AC100788.2-201ENST00000625199 2889 ntBASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 CSGALNACT1-201ENST00000332246 3872 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 DPF3-216ENST00000614862 4221 ntTSL 5 BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 NUTM1-202ENST00000438749 3922 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 AC113554.2-201ENST00000577647 4862 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 APLNR-202ENST00000606794 3609 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 POLR3B-201ENST00000228347 4273 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 PHACTR4-202ENST00000373839 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 CD274-201ENST00000381573 3343 ntTSL 5 BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
KRTAP4-11Q9BYQ6 ARID1A-204ENST00000430799 6521 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms