Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.38■□□□□ 0.05
LSM4Q9Y4Z0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.38■□□□□ 0.05
LSM4Q9Y4Z0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.38■□□□□ 0.05
LSM4Q9Y4Z0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LSM4Q9Y4Z0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
LSM4Q9Y4Z0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 MIR718-201ENST00000390190 70 ntBASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 KRT17P3-201ENST00000420566 1262 ntBASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 PNMA6B-201ENST00000538162 1200 ntBASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 AL049812.1-201ENST00000432563 2267 ntBASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
LSM4Q9Y4Z0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 AC079598.2-202ENST00000546624 1451 ntBASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 KRT18P68-201ENST00000392293 1000 ntBASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.36■□□□□ 0.05
LSM4Q9Y4Z0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 TEX21P-204ENST00000641479 1693 ntBASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 C1QBPP2-201ENST00000528754 825 ntBASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 RN7SL471P-201ENST00000580476 299 ntBASIC15.35■□□□□ 0.05
LSM4Q9Y4Z0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms